Nanoparticle-assisted NMR spin relaxation (NASR), which
makes internal
protein dynamics in solution directly observable on nanosecond to
microsecond time scales, has been applied to different nuclei and
relaxation processes of the same protein system. A model is presented
describing the transient interaction between ubiquitin and anionic
silica nanoparticles for the unified interpretation of a wealth of
experimental data including 2H, 13C, and 15N relaxation of methyl side chain and backbone moieties.
The best model, implemented using a stochastic Liouville equation,
describes the exchange process via an intermediary encounter state
between free and fully nanoparticle-bound protein. The implication
of the three-state binding model on the interpretation of NASR data
is discussed.