Background: The distinct direct and non-targeting effects of electron beam radiation on MCF-7 cells remain unclear. We aimed to investigate the effect of electron beam radiation and conditioned media of the irradiated MCF-7 cells on MCF-7 cells.Methods: The cell viability and apoptosis were assayed via MTT and flow cytometry analysis, respectively. Production of oxygen reactive species was evaluated by chemical fluorometric method, while the amount of extracellular vesicles was detected via acetylcholinesterase activity assay. Change in the expression of genes involved in apoptosis including caspase-3, caspase-8, and caspase-9 and stemness such as Sox-2 and Oct-4 were calculated through qPCR. Wound healing rate of cells was monitored via in vitro scratch assy. Results: Result showed that compared to control group, electron beam radiation decreased cell viability and increased apoptosis and oxygen reactive species as well as acetylcholinesterase activity in a dose-dependent manner (P<0.05). Concurrent with increasing dose of electron beam, the mRNA level of apoptotic genes (caspase-3, caspase-8, and caspase-9) and stemness related genes (Sox-2 and Oct-4) up-regulated following electron beam radiation. Wound healing rate of irradiated MCF-7 cells dose-dependently increased (P<0.05). After treatment with conditioned media from irradiated MCF-7 cells, the similar results were observed. Conditioned media from irradiated MCF-7 cells decreased viability of MCF-7 cells, mesenchymal stem cells, and HUVECs (P<0.05). Additionally, conditioned media from irradiated MCF-7 cells promoted apoptosis and wound healing rate as well as increased mRNA levels of apoptosis and stemness related genes (P<0.05). Conclusion: Findings suggest electron beam radiation could affect apoptosis and stemness in MCF-7 cells in direct and bystander manners.