Escherichia coli cells, the outer membrane of which is permeabilized with EDTA, release a specific subset of cytoplasmic proteins upon a sudden drop in osmolarity in the surrounding medium. This subset includes EF-Tu, thioredoxin, and DnaK among other proteins, and comprises ϳ10% of the total bacterial protein content. As we demonstrate here, the same proteins are released from electroporated E. coli cells pretreated with EDTA. Although known for several decades, the phenomenon of selective release of proteins has received no satisfactory explanation. Here we show that the subset of released proteins is almost identical to the subset of proteins that are able to pass through a 100-kDa-cutoff cellulose membrane upon molecular filtration of an E. coli homogenate. This finding indicates that in osmotically shocked or electroporated bacteria, proteins are strained through a molecular sieve formed by the transiently damaged bacterial envelope. As a result, proteins of small native sizes are selectively released, whereas large proteins and large protein complexes are retained by bacterial cells.The procedure of osmotic shock was originally introduced for the purpose of extracting periplasmic enzymes of Escherichia coli (20). In this procedure, bacterial cells are preincubated in a hyperosmotic sucrose solution supplemented with EDTA to permeabilize their outer membrane and then transferred into a solution of low osmolarity. The resulting osmotic pressure within shocked cells was believed to cause extrusion of the contents of the periplasm. Later experiments have shown, however, that osmotically shocked bacteria, while remaining viable, also release a number of cytoplasmic molecules, including ions, metabolites (22), and certain proteins. In fact, the major protein released from the shocked cells is a cytoplasmic constituent, translation elongation factor EF-Tu, at least half of which is extracted by the osmotic shock procedure (12, 13). The subset of released cytoplasmic proteins also includes thioredoxin (1, 17), molecular chaperone DnaK (6,8), and proteins involved in the biosynthesis of enterobactin (9), among others (5). Some foreign proteins expressed in the cytoplasm of E. coli have also been successfully extracted by the osmotic shock procedure (16, 23).It has been unclear what determines the selectivity of protein release from osmotically shocked bacteria, since the released cytoplasmic proteins share no apparent common characteristics distinguishing them from the majority of proteins, which are retained by the cells. How these proteins leave the cytoplasm in the absence of cell lysis has also remained an enigma. The most frequently entertained hypothesis postulates that these proteins normally concentrate in a hypothetical "osmotically sensitive compartment" of the bacterial cytoplasm, which is presumably adjacent to the zones of adhesion between the plasma membrane and the outer membrane and, therefore, is selectively extruded from the shocked cells (4, 8-10, 18, 23).This hypothesis leaves open, however, a s...