It is fascinating to observe the potential hazards associated with mining and quarrying activities, despite the limited number of comprehensive studies conducted in Algeria to evaluate their environmental impact. This particular investigation focuses on El M'cif quarry in Chekfa, located within the Nil watershed in Jijel, a region situated in the North‐East of Algeria. The primary objective is to assess the concentrations of lead (Pb), zinc (Zn), copper (Cu), and cadmium (Cd) in surface water, groundwater, stream sediments, and soil. Consequently, a suite of petrographic and geochemical analyses is undertaken to discern the origins of these heavy metals. Employing statistical methodologies, notably the Geo‐accumulation Index (Igeo), Pollution Index (PI+PI), and Ecological Risk Assessment (ER), this study is further fortified to quantify the levels of hazardous contaminants. The findings reveal that the concentrations of Cd and Pb in surface water are recorded at 22 and 654.3 μg/L, respectively, surpassing both Algerian and WHO standards. Meanwhile, the heavy metal concentrations in stream sediments are ranked in the order of Zn > Cu > Cd, with respectively mean concentrations of 1085.30, 14.60, and 1.49 (mg/kg). The mean concentrations of Zn, Pb, Cd, and Cu in soil are measured respectively at 219.78, 128.86, 20.76, and 2.42 (mg/kg). Based on the statistical methods such as I‐geo, PI, IPI, and RI, the research reveals that the sediments of the Aftis River are uncontaminated by Cu, moderately to heavily contaminated with Zn and heavily contaminated by Cd. Besides the soil samples which are found to be extremely contaminated with Cd, moderately contaminated with Pb, and uncontaminated with Cu and Zn. Additionally, the X‐ray fluorescence analysis reveals that the limestone extracted from the quarry contains 0.7% cadmium, suggesting that the quarry could potentially contribute to cadmium contamination. The surrounding rocks exhibit significant concentrations of iron, lead, and zinc. Therefore, the elevated levels of these heavy metals can primarily be attributed to geological factors rather than human activities, highlighting the combined influence of the extractive industry and the geological environment.