The bottlenose dolphin is one of the most common cetaceans found in the coastal waters, estuaries, and mangroves of Ecuador. However, its population size is gradually declining in the Gulf of Guayaquil, and anthropogenic factors including habitat degradation, uncontrolled dolphin watching, dredging activities, increasing maritime traffic, underwater noise, bycatch, and marine pollution have been implicated in their decline. Very little is known about contamination by persistent organic pollutants (POPs) and mercury in bottlenose dolphins from the Pacific coast of South America. To address this research gap, the first assessment of total mercury (THg) and POPs, including polychlorinated biphenyls (PCBs), organochlorine pesticides (OCPs), and polybrominated diphenyl ethers (PBDEs), in free-ranging bottlenose dolphins in mangroves (El Morro Mangrove Wildlife Refuge) of the Gulf of Guayaquil, was conducted in Ecuador in 2018. Dolphin samples (i.e., skin and blubber; n = 9), were obtained using dart biopsy field methods for contaminant analysis. POP concentrations ranged from 0.56 to 13.0 mg/kg in lipid weight, while THg ranged from 1.92 to 3.63 mg/kg in dry weight. The predominant POPs were OCPs (50% of POP), followed by PCBs (46%) and PBDEs (6.0%); particularly, p,p-DDE, the main DDT metabolite and a potent antiandrogenic, accounting for 42% of POP, ranging from 0.12 to ∼7.0 mg/kg lw, followed by PCB 153 (8.0%) and PCB 180 (5.0%). PBDE 47 accounted for 2.0% of POP. While the POP concentrations are lower than those found in dolphins from many other regions