An affinity chromatography technique was developed to isolate the five penicillin-binding components present in Bacillus subtilis membranes. The proteins were solubilized by the detergent Nonidet P-40, bound covalently to penicillin-substituted Sepharose, and subsequently eluted from the matrix with neutral hydroxylamine, which cleaves the penicilloyl-enzyme bond. Penicillin binding-component V, the D-alanine carboxypeptidase, makes up 1% of the total membrane protein. A modification of the above procedure enabled this enzyme to be obtained from the membrane in pure form in a single step with 50% overall recovery of enzymatic activity.Penicillin kills bacteria by preventing the last stage in cellwall biosynthesis, the cross-linking of nascent cell wall by the transpeptidase (1-3). In Escherichia coli, and probably other microorganisms, the transpeptidase is irreversibly inactivated by penicillin (4-6). It has been hypothesized that this inactivation is due to penicilloylation (2). Many strains of bacteria have been shown to bind radioactive penicillin. Moreover, the sensitivity of the organisms to penicillin correlates roughly with the rate at which penicillin binds to the cells (7-12). In some cases it may be that organisms are killed by a mechanism that does not involve covalent binding of penicillin. The transpeptidase of Bacillus megaterium is competitively rather than irreversibly inhibited by penicillins (13). Moreover, both E. coli and Streptomyces strains contain or excrete soluble D-alanine carboxypeptidases that are reversibly inhibited by penicillins (14, 15). The Streptomyces carboxypeptidase catalyzes a transpeptidation reaction using synthetic substrates (16), but it has not yet been shown that this extracellular enzyme is the physiological transpeptidase. In any case, the analysis of penicillin-binding components offers one promising approach to the study of cell-wall biosynthesis and the mode of action of penicillin.It has now become clear that there exists in a bacterial membrane not one protein that reacts irreversibly with penicillins, but several. Two lines of experimentation first suggested the occurrence of multiple penicillin-binding components. The D-alanine carboxypeptidase of B. subtilis, which is irreversibly inactivated by penicillins (17), could be inhibited in growing cells by 6-aminopenicillanic acid without killing the cells. In contrast, the cells were killed by cephalothin at concentrations that caused no inhibition of the carboxypeptidase (18). This result implied the presence of at least two penicillin-binding components, the cephalothinresistant carboxypeptidase and the cephalothin-sensitive penicillin killing site. In fact, isoelectric focusing of B. subtilis Abbreviation: SDS, sodium dodecyl sulfate. 3751 membranes to which radioactive penicillin had been bound revealed multiple peaks of radioactivity. Prior treatment with cephalothin abolished some but not all of the bands (19,20