Candida commonly occurs as commensal organisms on the mucosal surfaces of gastrointestinal, genitourinary tracts and skin of humans but can cause mucocutaneous or invasive infections [(Pappas et al., 2004), (Kabir & Ahmad, 2013), (Mayer, Wilson, & Hube, 2013)]. Candida are emerging as a potentially pathogenic fungus in patients with broncho-pulmonary diseases (Kali et al., 2013). 2. Problem Statement Most laboratories in Mombasa do not undertake Candida identification and antifungal susceptibility tests although the Vitek (BioMérieux) system enables clinical laboratories to perform routine identification of Candida and antifungal susceptibility easier and more accurately (Melhem et al., 2013). Various Candida species (Mainly mucocutaneous but also few cases of systemic Candida infections) are isolated from clinical specimens in the Microbiology laboratory at Mombasa Hospital with few cases of resistance to some antifungal agents identified (Mombasa hospital health management information system). 3. Research Objective The study was guided by the following specific objectives: i. To determine the prevalence and distribution of Candida species among patients attending Mombasa Hospital. ii. To determine the antifungal susceptibility profiles of the Candida isolated from clinical specimens in Mombasa Hospital. iii. To determine the risk factors associated with isolation of Candida among patients attending Mombasa Hospital