Oxygenic respiration and photosynthesis based on quinone redox reactions face a danger of wasteful energy dissipation by diversion of the productive electron transfer pathway through the generation of reactive oxygen species (ROS). Nevertheless, the widespread quinone oxido-reductases from the cytochrome bc family limit the amounts of released ROS to a low, perhaps just signaling, level through an as-yet-unknown mechanism. Here, we propose that a metastable radical state, nonreactive with oxygen, safely holds electrons at a local energetic minimum during the oxidation of plastohydroquinone catalyzed by the chloroplast cytochrome b 6 f. This intermediate state is formed by interaction of a radical with a metal cofactor of a catalytic site. Modulation of its energy level on the energy landscape in photosynthetic vs. respiratory enzymes provides a possible mechanism to adjust electron transfer rates for efficient catalysis under different oxygen tensions.cytochrome b 6 f | reactive oxygen species | semiquinone | electron paramagnetic resonance | electron transport P hotosynthetic and respiratory cytochromes bc 1 /b 6 f (Fig. 1A) generate a proton-motive force (pmf) that powers cellular metabolism by using the Gibbs free energy difference (ΔG) between hydroquinone (QH 2 ) derivatives (Fig. 1B) and oxidized soluble electron transfer proteins (e.g., cytochrome c or plastocyanin) (1, 2). To increase the efficiency of this process, which is critical for the yield of the generated pmf, one part of the enzyme recirculates electrons to the quinone pool in the membrane (Q pool), whereas the second part steers the electrons to the cytochrome c pool, powering the electron recirculation (Fig. 1C). This mechanism, which is best established for the cytochrome bc 1 (cyt bc 1 ) (3, 4), with supporting data for the cytochrome b 6 f (cyt b 6 f) (5), discussed in ref. 2, is based on bifurcation of the route for two electrons released upon oxidation of QH 2 at one of the catalytic sites-the Q p site, (Q p ), (Fig. 1D) (3-5). A model for the energetics of this reaction assumes that one electron derived from the two-electron QH 2 donor is transferred, through the high-potential cofactor chain ("steering part" in Fig. 1C) to plastocyanin or cytochrome c, whereas the second electron is transferred across the membrane through low-potential cofactors ("recirculation" part in Fig. 1C).The electronic bifurcation process requires formation of a short-lived and reducing redox intermediate-ubisemiquinone (USQ) or plastosemiquinone (PSQ) (4, 6, 7). However, such an intermediate in an oxygenic environment would readily reduce oxygen to form superoxide radical, (O 2 − ), compromising the efficiency of energy conservation (8). Even in cyt b 6 f where the level of superoxide production through this pathway is at least an order of magnitude greater than that from yeast cyt bc 1 , the branching ratio for electron transfer to O 2 forming O 2 − is only 1-2% of the total flux (6). The low absolute level of O 2 − production in native proteins implies the e...