Metynnis lippincottianus is a freshwater native fish to the Guiana basin and Amazon basin and was recently introduced into the São Francisco River in Brazil. This study aimed to determine the helminths parasites of M. lippincottianus from the Três Marias Reservoir, upper São Francisco River, State of Minas Gerais, Southeast Brazil. From 67 hosts examined, 63 were parasitized by 9,257 helminths represented by five species: Dadayius sp. [prevalence (P) = 1.49%, mean abundance (MA) = 0.01]; proteocephalid plerocercoids (P = 43.28%, MA = 5.04); Procamallanus (Spirocamallanus) inopinatus (P = 29.85%, MA = 0.54); Spinitectus rodolphiheringi (P = 2.99%, MA = 0.03); Spinoxyuris sp. (P = 85.07%, MA = 132.54). These findings show that M. lippincottianus is an additional host to the helminths infecting fish native to the São Francisco River (plerocercoids, P. (S.) inopinatus and S. rodolphiheringi), and highlight the fact that Dadayius sp. and Spinoxyuris sp., which were typically found in native Metynnis spp. in other basins, also parasitizing the non-native serrasalmid M. lippincottianus in São Francisco River. These two helminth species have thrived in this freshwater ecosystem with the expansion of the geographical distribution of the host species to the São Francisco River.