Evaluating the diversity of soil microbial communities in vineyards relative to adjacent native ecosystems

Holland, Taylor; Bowen, Pat; Bogdanoff, Carl; Lowery, Tom; Shaposhnikova, O. Yu.; Smith, Scott A.; Hart, Miranda M.

doi:10.1016/j.apsoil.2015.12.001

Cited by 40 publications

(35 citation statements)

References 78 publications

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“…Similarly, Meyling et al (2009) saw greater diversity of the entomopathogenic fungus, B. bassiana, in a natural area bordering a cropping system. The increased fungal diversity and unique AM fungal community seen by Holland et al (2016) may also have been driven by native plants in the natural sites adjacent to vineyard blocks. Agricultural habitats that more closely resemble the surrounding natural landscape may therefore benefit from the efficiency of co-evolved organisms, but it is unknown if these benefits would remain in the presence of other disturbances associated with agricultural management.…”

Section: Native Plant Species In Cover Cropsmentioning

confidence: 99%

“…The most appropriate comparisons contrast microbial communities from neighboring natural grasslands with agronomic fields (Garbeva et al 2006;Holland et al 2016;Meyling et al 2009), which offers some insight into the relationship between plant provenance and soil microbes but is conflated by too many confounding variables. Garbeva et al (2006) found greater suppression of the generalist pathogen Rhizoctonia solani AG3 in soil collected from a native grassland as compared to soil from the same site that had been converted to agricultural production.…”

Section: Native Plant Species In Cover Cropsmentioning

confidence: 99%

See 1 more Smart Citation

Cover crops to increase soil microbial diversity and mitigate decline in perennial agriculture. A review

Vukicevich

Lowery

Bowen

et al. 2016

Agron. Sustain. Dev.

288

157

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Section: Native Plant Species In Cover Cropsmentioning

confidence: 99%

Section: Native Plant Species In Cover Cropsmentioning

confidence: 99%

Cover crops to increase soil microbial diversity and mitigate decline in perennial agriculture. A review

Vukicevich

Lowery

Bowen

et al. 2016

Agron. Sustain. Dev.

288

157

View full text Add to dashboard Cite

show abstract

“…However, the microbial diversity of vineyard soil is greatly affected by the environment. Previous work on soil microbial communities in vineyards has indicated that long term continuous harvesting of vineyards will reduce the diversity (26) Other studies have shown that older vineyards vary in the amount and type of grapevine root secretions, which could indirectly affect the amount and type of microorganisms in the soil (27). The three vineyards in this study have been established for a long time and theoretically they should all experience relatively low microbial diversity.…”

Section: Discussionmentioning

confidence: 95%

Microbial diversity analysis of vineyards in the Xinjiang region using high-throughput sequencing

et al. 2018

J. Inst. Brew.

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The microbial diversity of soil, grape leaves and grape fruits from three wine‐growing areas in Xinjiang, China were analysed using high‐throughput sequencing. Results show that five fungal phyla and 237 fungal genera, as well as eight bacterial phyla and 314 bacterial genera were detected in 27 samples. For both fungi and bacteria, the microbial diversity was most complex in the soil, followed by grape leaves and fruit. In the soil samples, Ascomycota, Sordariales, Tetracladium and Geomyces were the dominant fungal genus, while Arthrobacter, Kaistobacter and Skermanella were the dominant bacterial genus. With regard grape leaves and fruit, Aureobasidium, Cryptococcus, Aspergillus and Pleosporaceae were the dominant fungal genus, while Pseudomonas, Sphingomonas and Adhaeribacter were the dominant bacterial genus. Different geographical locations were associated with differences in microbial diversity. The complex microflora of vineyards provides a basis for further microbial screening and its potential utilization in different regions. © 2018 The Institute of Brewing & Distilling

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“…Furthermore, there were significant correlation between physicochemical indices of grape berry quality and six functional categories of carbon sources. These results are similar to other research in that the age of vines could be a controlling factor of soil changing processes in vineyards . In fact, the formation of bacterial community composition over a long competitive process of nutrients and other resources were sparsely available in rhizosphere soil …”

Section: Discussionmentioning

confidence: 99%

“…These results are similar to other research in that the age of vines could be a controlling factor of soil changing processes in vineyards. 44,45 In fact, the formation of bacterial community composition over a long competitive process of nutrients and other resources were sparsely available in rhizosphere soil. 42 In this study, the samples were collected from one vineyard, which has a strict and unitary cultivation model in order to exclude the influence of other factors.…”

Section: Discussionmentioning

confidence: 99%

Characterization of rhizosphere bacterial community and berry quality of Hutai No.8 (Vitis vinifera L.) with different ages, and their relations

Han

Cai³

et al. 2019

J Sci Food Agric

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BACKGROUND Rhizosphere soil microbial communities play an important role in grapevine growth. However, the relationship of the rhizosphere soil bacterial community and berry quality of Hutai No.8 grape with different tree‐ages is unclear. In this work, the Biolog‐ECO technique was used to explore the functional diversity of the rhizosphere soil bacterial communities of Hutai No.8 grape with five ages (3, 5, 7, 9 and 11 years old). Meanwhile, grape berry quality indicators related to berry appearance, flavor and functional substance quality was also examined. RESULTS Principal component analysis of grape berry quality mainly separated 3‐year‐old (first bear fruit) and the other tree‐ages. In particular, peel weight and total soluble solid content of 3‐year‐old grape berry was significantly less than that of others. Furthermore, average well color development, species richness and Shannon's diversity index increased significantly with grapevine age. Moreover, the metabolic activities and functional diversity of soil microbial communities in using carbon sources were significantly increasing with grapevine age. Moreover, there were significant correlation between physicochemical indices of grape berry quality and six functional categories of carbon sources. CONCLUSION Tree‐ages could greatly affect the rhizosphere microbial community structure and richness, and then affect the grape berry quality. © 2019 Society of Chemical Industry

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Evaluating the diversity of soil microbial communities in vineyards relative to adjacent native ecosystems

Cited by 40 publications

References 78 publications

Cover crops to increase soil microbial diversity and mitigate decline in perennial agriculture. A review

Cover crops to increase soil microbial diversity and mitigate decline in perennial agriculture. A review

Microbial diversity analysis of vineyards in the Xinjiang region using high-throughput sequencing

Characterization of rhizosphere bacterial community and berry quality of Hutai No.8 (Vitis vinifera L.) with different ages, and their relations

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