Plate counts and small subunit (SSU) rRNA abundance were used to study the effects of fructo-oligosaccharides (FOS), fructose, or galacto-oligosaccharides (GOS) on bi®dobac-terial populations in human faecal microbiotas. The bacteria were grown in pHcontrolled anaerobic fermentation vessels. Untreated cultures and fructose-amended fermenters were used as controls. Bi®dobacterium longum, B. adolescentis and B. angulatum comprised the dominant bi®dobacterial populations throughout the experiment. No major differences were found in the four treatments, in terms of viable counts of the organisms or of total populations of bi®dobacteria at any time point. However, large differences were observed with respect to the abundance of bi®dobacterial SSU rRNA between the treatments. Greatest bi®dobacterial SSU rRNA abundance was seen in FOS cultures, with the lowest in the untreated control fermentation. GOS and fructose also increased bi®dobacterial SSU rRNA. Cultures supplemented with FOS and GOS were also associated with lower colony counts and SSU rRNA abundance for Escherichia coli, compared with fructose-supplemented and control fermenters. At the 24-h time point, the untreated control contained 19.8 ìg of enterobacterial SSU rRNA/ml of culture¯uid, compared with 11.4 ìg/ml for the fructose fermentation, and 2.6 and 0.5 ìg/ml for the FOS and GOS culture vessels, respectively.