The layout of the cathode flow field largely determines the net output power of the proton exchange membrane fuel cell (PEMFC). To make the normal mass transfer effect best, the longitudinal channel was waved based on four serpentine flow channels, and the effects of sag depth and longitudinal channel width on the output efficiency of the cell were explored. The results show that the wave channel design systematically enhances the forced convection between adjacent channels, which can prevent a large zone of oxygen starvation zone at the outlet of the channel. The increase of the normal velocity in the gas transmission process will inevitably induce a significant enhancement of the mass transfer effect and obtain a higher current density in the reaction zone. For the longitudinal channel width, it is found that increasing its size in the effective range can greatly reduce the channel pressure drop without reducing the output power, thereby improving the overall efficiency. When the sag depth and longitudinal channel width gradient are 0.6 mm and 0.2 mm respectively, PEMFC can obtain the best comprehensive performance.