Background: Cognitive functions are altered in patients with chronic kidney disease. However it is suggested that cognitive functions, at least partially, improve after kidney transplantation. A possible cause for this improvement could be the reduction of uremic retention solutes after transplantation. This study assessed the association between the changes in uremic toxin concentration with the changes in cognitive function in patients after kidney transplantation. Methods: 10 kidney transplant recipients were included and compared to 18 controls (9 patients on hemodialysis, and 9 patients with CKD stage 4 or 5 (eGFR < 30ml/min/1.73m 2 not on dialysis). An extensive neuropsychological assessment, covering the five major cognitive domains, that is, memory, attention and concentration, information processing speed, abstract reasoning, and executive function, was done before, at one week and three months after transplantation. Similarly assessments of the 18 matched control patients were performed longitudinally over a period of three to five months. Concentrations of sixteen uremic retention solutes namely indoxylglucuronide, pcresylglucuronide, phenylglucuronide, CMPF, indoxyl sulphate, p-cresyl sulphate, hippuric acid, phenyl sulphate, kynurenine, tryptophan, kynurenic acid, tyrosine, indole-3-acetic acid, phenylalanine, trimethylamine N-oxide (TMAO), and phenylacetylglutamine were measured in serum samples collected at the time of the neuropsychological assessments. Results: A significant improvement in cognitive function was only found in the processing speed domain, and observed in both transplant patients as well as CKD patients. No significant differences between transplant patients and the control groups were seen in the other cognitive domains. As expected, the serum concentration of most uremic toxins decreased significantly within one week after kidney transplantation. Conclusions: There was no significant improvement in cognitive function that could be specifically related to kidney transplantation in the first 3 months after the procedure. These data do not support the notion that uremic toxins exert an immediate effect on cognitive function.