“…Similar evolutionary trajectories have been described for other pathogens, including Pseudomonas, Legionella, Listeria, Francisella, Burkholderia, Mycobacteria and others [ 21–25 ]. With their reduced genomes compared to that of the broad host range pathogen B. bronchiseptica , human-restricted B. pertussis and B. parapertussis are no longer able to survive in the environment [ 26 ]. B. pertussis also lost the ability to survive within amoeba and is considered primarily an extracellular pathogen, although some reports have described its admittedly limited capacity to survive within respiratory epithelial and phagocytic cells, which may be an evolutionary remnant [ 27–29 ].…”