The presynaptic plasma membrane protein SNAP-25 (synaptosome-associated protein of 25 kDa) has been implicated as one of several neural-specific components that direct constitutive fusion mechanisms to the regulated vesicle trafficking and exocytosis of neurotransmitter release.There exist two alternatively spliced isoforms of a and b, which differ in a putative membrane-interacting domain. We show that these two isoforms have distinct quantitative and anatomical patterns of expression during brain development, in neurons, and in neuroendocrine cells and that the proteins localize differently in neurites of transfected PC12 pheochromocytoma cells. These findings indicate that alternative isoforms of SNAP-25 may play distinct roles in vesicular fusion events required for membrane addition during axonal outgrowth and for release of neuromodulatory peptides and neurotransmitters.In the nervous system, the regulated release of neurotransmitters and neuromodulatory peptides and the addition of proteins and other constituents required for neurite outgrowth proceed through intracellular trafficking and fusion of vesicles at the plasma membrane (for review, see refs. 1-4). This regulated fusion of donor vesicle and acceptor (target) membranes is likely mediated by the same ubiquitious ATPdependent machinery, composed of soluble N-ethylmaleimide-sensitive factor (NSF) and NSF-associated proteins (SNAPs), that is utilized in constitutive pathways of all eukaryotic cells (5). To provide specificity for the fusion process, distinct sets of related proteins have been postulated to serve as membrane receptors, or SNAREs (6). These enable correct recognition between vesicle and target membranes at different intracellular compartments, and they engage the general fusion machinery. It is likely that specific SNAREs, together with additional cell-specific auxiliary proteins, are critical for the specialized sorting, targeting, and final recycling of vesicles which are required for the Ca2+-triggered release of neurotransmitter and modulatory peptides unique to neurons and neuroendocrine cells (7-9). Although evidence suggests that membrane addition to the expanding plasmalemma of axonal growth cones is Ca2+ dependent (10), it is thought that there are independent vesicle-targeting and fusion mechanisms that chiefly support either axon outgrowth or neurotransmitter release. Recent studies do suggest, however, that at least one of the SNAREs, SNAP-25, is a key player in membrane fusion events of both developing and mature neurons.The presynaptic nerve terminal protein SNAP-25 (synaptosome-associated protein of 25 kDa; ref. 11) has been identified as a plasma membrane protein that together with syntaxin and the synaptic vesicle proteins VAMP/synaptobrevin and synaptotagmin are thought to constitute an initial SNARE docking complex for regulated exocytosis (5, 12, 13). After docking, this complex can incorporate into a 20S fusion parThe publication costs of this article were defrayed in part by page charge payment. This a...