Brazil has the highest incidence of atmospheric discharges, on average of 77.8 million hitting the country yearly. Companies providing post-harvest services have a high monetary value concentrated in their predominantly metallic structures. Atmospheric discharge protection systems (ADPS) are used in this context to protect the facilities and people, composed of several elements that require visual inspection with a certain periodicity, an activity framed as working at height. This research aimed to establish a methodology for employing a Remotely Piloted Aircraft System (RPAS) in the visual analysis of the operational condition of external atmospheric discharge protection systems components located in grain storage structures to collect information during the preliminary risk analysis and planning of activities at height. A survey of the current literature related to the subject was carried out, in addition to the norms, inspection agencies, and operational prerequisites of this type of equipment in the national territory. Finally, a method was created and validated based on the inspection checklist with the main points for checking, which generates a score that represents the urgency level of intervention, applied in a unit located in western Paraná, Brazil, on 11/28/2022. This procedure eliminated the risk of workers falling during the planning and inspection stage of the structures, which helped the qualified professional to issue the technical inspection report more quickly. The disadvantage is related to the dependence on favorable weather conditions.