1997
DOI: 10.1021/ja963076x
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Explanation of Where and How Enantioselective Binding Takes Place on Permethylated β-Cyclodextrin, a Chiral Stationary Phase Used in Gas Chromatography

Abstract: A computational study was undertaken to discern where and how chiral alkanes, alcohols, and acetates enantioselectively bind to permethyated -cyclodextrin, the most commonly used chiral stationary phase in gas chromatography. We found that enantioselective binding data could be reproduced with standard molecular dynamics techniques if averages are taken over multiple trajectories of nanosecond simulation times each, while Metropolis Monte Carlo simulations using rigid body molecules are unable to reproduce chr… Show more

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Cited by 89 publications
(54 citation statements)
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“…The chiral discrimination mechanism on CSPs has been examined using spectroscopic 13,14 and computer-aided methods. 15,16 Computational studies of the chiral discrimination mechanism on phenylcarbamate derived cellulose have been reported and the results of computational calculations show good agreement with chromatographic results. 17 The insecticidal activities of pyrethroids are closely PYRETHROIC ACID ESTERS related to their absolute configuration.…”
mentioning
confidence: 71%
“…The chiral discrimination mechanism on CSPs has been examined using spectroscopic 13,14 and computer-aided methods. 15,16 Computational studies of the chiral discrimination mechanism on phenylcarbamate derived cellulose have been reported and the results of computational calculations show good agreement with chromatographic results. 17 The insecticidal activities of pyrethroids are closely PYRETHROIC ACID ESTERS related to their absolute configuration.…”
mentioning
confidence: 71%
“…To determine the preferential binding site of the guest molecule, the number densities of presence in a volume element are calculated. We define a grid in which the distance between two consecutive points is 0.5 Å and the number of guest positions in each volume element is the resulting number density for each trajectory and for the guest [10][11][12]. The position probability density is calculated by dividing the number density in a volume element by the total number of centre of mass positions of the guest.…”
Section: Expression Of the Interaction Potentialmentioning
confidence: 99%
“…15 together with Fig. 8 (CSD code, DOCYID, 16) the example of g-CD; the guest, 12-crown-4-ether), r increases more than in b-CD. The guest molecule has large r width but occupies a narrow Z-value range compared with the guests mentioned in the above two examples, and thus the guest is located in the large Z-value of the CD region and Vol.…”
mentioning
confidence: 94%
“…For permethylated b-CD, Lipkowitz et al found the most enantio-diŠerentiating region of CD for chiral recognition and made contour plots. 16) Their contour plot method is also based on the exhibition of the actual 3-dimensional structure by the method of perspective drawing.…”
Section: Introductionmentioning
confidence: 99%