Exploring microbial diversity responses in agricultural fields: a comparative analysis under pesticide stress and non-stress conditions

Abstract

Exposure to pesticides changes the microbial community structure in contaminated agricultural fields. To analyze the changes in the native microbial composition qRT-PCR, a metagenomic study was conducted. The qRT-PCR results exhibited that the uncontaminated soil has a higher copy number of 16S rDNA relative to the soil contaminated with pesticide. Metagenome analysis interprets that uncontaminated soil is enriched with proteobacteria in comparison with pesticide-contaminated soil. However, the presence of Actinobacteria, Firmicutes, and Bacteroides was found to be dominant in the pesticide-spiked soil. Additionally, the presence of new phyla such as Chloroflexi, Planctomycetes, and Verrucomicrobia was noted in the pesticide-spiked soil, while Acidobacteria and Crenarchaeota were observed to be extinct. These findings highlight that exposure to pesticides on soil significantly impacts the biological composition of the soil. The abundance of microbial composition under pesticide stress could be of better use for the treatment of biodegradation and bioremediation of pesticides in contaminated environments.

Editorial: Potential of the plant rhizomicrobiome for bioremediation of contaminants in agroecosystems

“…In the past decade, research has unveiled another remarkable aspect of this relationship: ability of rhizomicrobiomes to remediate contaminated agro-ecosystems. Potential rhizobacterial communities accelerate the contaminant degradation processes in a plant assisted co-metabolism process ( Su et al., 2022 ; GAngola et al., 2023 ). The rhizospheric zone can tolerate contaminant stress, especially xenobiotics and pesticides, primarily due to microbial functions associated with metabolic biodegradation of contaminants ( Lü et al., 2023 ).…”