2008
DOI: 10.1016/j.bbabio.2008.04.033
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Exploring the inhibitor binding pocket of respiratory complex I

Abstract: Numerous hydrophobic and amphipathic compounds including several detergents are known to inhibit the ubiquinone reductase reaction of respiratory chain complex I (proton pumping NADH:ubiquinone oxidoreductase). Guided by the X-ray structure of the peripheral arm of complex I from Thermus thermophilus we have generated a large collection of site-directed mutants in the yeast Yarrowia lipolytica targeting the proposed ubiquinone and inhibitor binding pocket of this huge multiprotein complex at the interface of t… Show more

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Cited by 84 publications
(71 citation statements)
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“…At the levels studied, cellular ATP levels remain constant, though there may be a non-significant transient decrease on first exposure of cells to the compounds. This contrasts strongly with the effects of rotenone, an insecticide which produces long-lasting significant decreases in ATP levels (Fendel et al 2008). These compounds appear to have a similar mode of action to metformin (Bridges et al 2014, Brunmair et al 2004, El-Mir et al 2000, Fontaine 2014, Owen et al 2000, Zhou et al 2001, the drug of choice for treating type 2 diabetes.…”
Section: Discussioncontrasting
confidence: 39%
“…At the levels studied, cellular ATP levels remain constant, though there may be a non-significant transient decrease on first exposure of cells to the compounds. This contrasts strongly with the effects of rotenone, an insecticide which produces long-lasting significant decreases in ATP levels (Fendel et al 2008). These compounds appear to have a similar mode of action to metformin (Bridges et al 2014, Brunmair et al 2004, El-Mir et al 2000, Fontaine 2014, Owen et al 2000, Zhou et al 2001, the drug of choice for treating type 2 diabetes.…”
Section: Discussioncontrasting
confidence: 39%
“…As death inducers, we used amphotericin B, a polyene antibiotic often used for treatment of systemic candidiasis or aspergillosis (52); phytosphingosine, with established antifungal activity against N. crassa and Aspergillus nidulans (8,9); and the oxidative stress agent hydrogen peroxide (44). As complex I inhibitors, we employed diphenyleneiodonium (DPI), a rather nonspecific inhibitor of NADH dehydrogenases (2, 37), and piericidin A, which interferes with the ubiquinone binding site of the enzyme, as does rotenone (20,47). We used concentrations of death inhibitors that led to a visible effect on fungal growth.…”
Section: Resultsmentioning
confidence: 99%
“…Overnight cultures were prepared in YPD and washed, and ϳ10 3 cells/10 l were inoculated into microtiter wells. CI to CV ETC inhibitors (Sigma-Aldrich), including rotenone (10 g/ml), C12E8 (4 g/ml), PdA (4 g/ml), TTFA (10 g/ml), antimycin A (10 g/ml), KCN (10 g/ml), and oligomycin (10 g/ml), were used alone or in combination with fluconazole (22,23). Growth was evaluated by measuring cell density (optical density at 595 nm [OD 595 ]) after 24 h of incubation at 30°C.…”
Section: Methodsmentioning
confidence: 99%