Osteoarthritis is one of the most common chronic diseases in the elderly, which has caused a heavy burden to the family and society. At present, the clinical treatment can only be total joint replacement, but is hard to prevent the degeneration of cartilage tissue. The molecular mechanism of OA, especially the role of inflammation in disease progression, has been reported, but it is still unclear.Here, we first collected synovial tissues of 8 OA patients and 2 RA patients as controls, and detected the expression profiles of lncRNA, miRNA and mRNA in tissues by RNA-seq technology, and tried to find out the differentially expressed genes and key pathways in OA patients.Compared with the control group, 343 mRNAs, 270 lncRNAs and 247 miRNAs were significantly up-regulated, 232 mRNAs, 109 lncRNAs and 157 miRNAs were significantly down regulated. Then we predicted the targeted mRNAs of dysregulated lncRNAs. Through pathway enrichment and functional annotation of these target genes, we identified 12 differentially expressed transcripts related to inflammation, including CHST11, ALDH1A2, TREM1, IL-1β, IL-8, CCL5, LIF and miR-146a-5p, miR-335-5p, as well as lncRNA GAS5, LINC02288 and LOC101928134.In this study, we identified the differential expression of inflammation related genes and ncRNA in synovial tissue. These differentially expressed transcripts may indicate the network of ceRNA net in synovial tissue and its effect on OA progression. Our research will help to explore the pathogenesis and key therapeutic targets of OA.