Interferons (IFNs)1 are a family of multifunctional cytokines that block viral infection, inhibit cell proliferation, and modulate cell differentiation. Whereas type I IFNs (IFN-␣, IFN-, and IFN-) bind to a common cell-surface receptor, the receptor for type II IFN (IFN-␥) is a distinct entity (1). IFNs transduce signals from the cell surface, resulting in selective gene induction through the activation of JAK tyrosine kinases and STAT transcription factors (1-3). Upon JAK-mediated tyrosine phosphorylation, the STAT proteins (STAT1, STAT2, and STAT3) dimerize and translocate to the nucleus to activate transcription of IFN-stimulated genes (3). IFN also activates the nuclear factor-B (NF-B) transcription factor in a serine/threonine kinase-dependent signaling pathway that protects cells against apoptosis (4, 5).NF-B regulates the expression of genes involved in cell signaling, stress responses, growth, survival, and apoptosis by binding to cis-acting B sites in the promoters and enhancers of these genes. Viruses, cytokines, lipopolysaccharides, and other stimulating agents promote NF-B translocation to the nucleus and DNA binding. Active DNA-binding forms of NF-B are dimeric combinations of Rel proteins (p50, p52, c-Rel, v-Rel, RelA/p65, and RelB). In most cell types, the predominant form of NF-B is the p50⅐p65 heterodimer. NF-B dimers are retained in the cytoplasm of unstimulated cells in an inactive state by the binding of a family of inhibitory IB proteins.Whereas STAT proteins play crucial roles in the transcriptional response to IFN-␣/ and in the induction of antiviral activity, the role of NF-B in IFN signaling and action has not been studied extensively. To identify the functional role of NF-B in IFN action, sensitivity to the antiviral effect of IFN was examined in fibroblasts that either had normal NF-B function or had a functional deletion of the IFN-induced NF-B pathway by germ line disruption of the Rel p50 and p65 proteins. Antiviral assays demonstrated that NF-B knockout (KO) fibroblasts were sensitized to the antiviral action of IFN-. To determine the relationship between gene regulation by IFN- and antiviral activity, microarray analysis was performed on RNA samples collected from IFN-treated murine fibroblasts. Microarray analysis identified several classical IFN-stimulated genes (ISGs) involved in the antiviral action of IFN. Quantitative real-time PCR demonstrated that, whereas the IFN-induced expression of some ISGs was enhanced in NF-B KO cells relative to mouse wild-type fibroblasts, the IFN-induced expression of other ISGs was lower in NF-B KO cells. Our results demonstrate the distinctive role of NF-B in the regulation of ISGs and in the induction of antiviral activity. Thus, the IFN-activated NF-B pathway not only counterbalances apoptosis, but also regulates the expression of ISGs and the induction of antiviral activity.
EXPERIMENTAL PROCEDURESBiological Reagents and Cell Culture-Recombinant Chinese hamster ovary cell-expressed rat IFN- was obtained from Biogen Idec, Inc. (6). The b...