2017
DOI: 10.1101/126177
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Extensive phenotypic plasticity in a seasonal butterfly limits potential for evolutionary responses to environmental change

Abstract: Understanding how populations adapt to changing environments is a major goal in evolutionary biology and ecology, and particularly urgent for predicting resilience to climate change. Phenotypic plasticity, the ability to express multiple phenotypes from the same genome, is a widespread adaptation to short-term environmental fluctuations, but whether it facilitates adaptation to environmental change on evolutionary timescales, such as those under climate change, remains contentious. Here, we investigate plastic… Show more

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“…Filtered libraries were reassembled using the heterozygous-aware assembler Platanus v. 1.2.4 [ 21 ], with default parameters. Contigs were further scaffolded with the mate pair libraries using SSPACE v. 3.0 [ 22 ] and with 35 747 assembled B. anynana transcripts [ 23 ] using a combination of L_RNA_scaffolder [ 24 ] and SCUBAT v. 2 [ 25 ]. A final round of scaffolding was performed with PacBio long reads (fastq files error-corrected using the RS_Preaassembler.2 protocol) using SSPACE-LongRead v. 1.1 [ 26 ].…”
Section: Data Descriptionmentioning
confidence: 99%
“…Filtered libraries were reassembled using the heterozygous-aware assembler Platanus v. 1.2.4 [ 21 ], with default parameters. Contigs were further scaffolded with the mate pair libraries using SSPACE v. 3.0 [ 22 ] and with 35 747 assembled B. anynana transcripts [ 23 ] using a combination of L_RNA_scaffolder [ 24 ] and SCUBAT v. 2 [ 25 ]. A final round of scaffolding was performed with PacBio long reads (fastq files error-corrected using the RS_Preaassembler.2 protocol) using SSPACE-LongRead v. 1.1 [ 26 ].…”
Section: Data Descriptionmentioning
confidence: 99%