Estuaries are bodies of water with one or more open connections to the sea (Leuven et al., 2016) which develop at the land-sea interface due to delivery of sediment from both rivers and the coast (Nicholls et al., 2020). Estuaries that have developed naturally tend to have a converging planform shape, often with mutually evasive ebb and flood channels which create a multi-channel system (Jeuken & Wang, 2010;van Dijk et al., 2021;Weisscher et al., 2022). They have several intertidal shoals and bars, particularly at their widest points (Leuven et al., 2016), and extensive floodplains (van Veen et al., 2005). However, many estuaries globally are now changing to a new enforced equilibrium as they are increasingly altered by human activities. The plains surrounding estuaries and deltas are rapidly urbanizing, leading to a variety of economic, environmental and ecological questions and concerns regarding long-term sustainability and management of these human-influenced systems (Loucks, 2019). Width is dramatically reduced as floodplains are embanked and intertidal areas are reclaimed, to be used for housing, ports, harbors and development of urban centers (Cox et al., 2022). Meanwhile, flood protection structures such as dikes, groynes and flood barriers are often implemented, redirecting flow and altering sediment transport regimes (O'Dell et al., 2021;Ten Brinke et al., 2004). Estuary depth is also commonly increased by dredging at a variety of scales.Estuaries are commonly identified as hotspots for climate risk (Hill et al., 2020) because they are uniquely threatened by both sea-level rise (SLR) and river basin-wide climate changes (e.g., glacial melt, temperature