The conserved multifunctional protein Gle1 regulates gene expression at multiple steps: nuclear messenger (m)RNA export, translation initiation, and translation termination. A GLE1 mutation (FinMajor) is causally linked to human lethal congenital contracture syndrome-1 (LCCS1); however, the resulting perturbations on Gle1 molecular function were unknown. FinMajor results in a Proline-Phenylalanine-Glutamine peptide insertion within the uncharacterized Gle1 coiled-coil domain. Here we find that Gle1 self-associates both in vitro and in living cells via the coiled-coil domain. Electron microscopy reveals high molecular mass Gle1 oligomers form ∼26 nm in diameter disk-shaped particles. With the Gle1-FinMajor protein, these particles are malformed. Moreover, functional assays document a specific requirement for proper Gle1 oligomerization during mRNA export but not for Gle1’s roles in translation. These results identify a novel mechanistic step in Gle1’s mRNA export function at nuclear pore complexes, and directly implicate altered export in LCCS1 disease pathology.