Objective To explore quality of life (QOL) using the individualized Patient Generated Index (PGI) in young adults who were diagnosed with JIA in childhood, and examine associations between PGI ratings and standardized health-related outcome measures. Methods Patients (N=79, mean 25.1 ±4.2 yrs, 72% female) completed the PGI and the standardized measures: Health Assessment Questionnaire Disability Index, Medical Outcome Study 12-item Short-Form (SF-12; physical and mental health-related QOL), Brief Pain Inventory Short-Form (pain severity and interference), Hopkins Symptom Checklist-5 and visual analogue scale for fatigue. Information on morning-stiffness, medications, and demographics was also collected. Patients were compared to 79 matched controls. Results The most frequently nominated areas of importance for patients' personally-generated QOL (assessed by PGI) were physical activity (n=38, 48%), work/school (n=31, 39%), fatigue (n=29, 37%) and self-image (n=26, 33%). Nomination of physical activity was associated with older age, more pain interference and morning-stiffness. Nomination of fatigue was associated with current use of disease-modifying antirheumatic drugs, while nomination of self-image was associated with polyarticular course JIA and pain interference. Nomination of work/school was not associated with other factors. Higher PGI scores (indicating better QOL) correlated positively with all SF- 12 subscales except role-emotional and negatively with disability, pain severity, pain interference and morning-stiffness. Compared to controls, patients had more pain, poorer physical health-related QOL and less participation in full-time work or school. Conclusion Physical activity, work/school, fatigue and self-image were frequently nominated areas affecting QOL in young adults with JIA. The PGI included aspects of QOL not covered in standardized measures.