This research aimed to isolate lactic acid bacteria (LAB) from the bowl of saltwater fish to assess their probiotic properties. Nineteen isolates of LAB including Lactobacillus plantarum, Lactobacillus acidophilus, Lactobacillus fermentum, Lactococcus lactis, Enterococcus hirae, Enterococcus lactis, Pediococcus pentosaceus, Pediococcus acidilactici, and Pediococcus lolli were recognized using molecular tools. All the isolates survived in the simulated conditions of the GI tract. Auto-aggregation ranged from 01.3 ± 0.5% to 82.6 ± 1.4% and hydrophobicity with toluene ranged from 3.7 ± 1.6% to 69.4 ± 1.3%, while the range of hydrophobicity with xylene was from 02.2 ± 1.6% to 56.4 ± 2.1%. All the isolates of lactobacilli, pediococci, enterococci, and lactococci indicated variable sensitivity and resistance towards clinical antibiotics. Non-neutralized cell free supernatant of isolates F12 and F15 showed antimicrobial activity against all the 8 evaluated enteric pathogens. Cluster analysis of identified potential probiotic bacteria based on heat-map and PCA methods also highlighted the priority of isolates F3, F7, F12, and F15 as bio-control agents in fishery industry. The findings of this study may essentially contribute to the understanding of the probiotic potential of LAB in saltwater fish, in order to access their probiotic characterization for use as biocontrol in fishery.