The process of water movement in the excurrent duct system of the male reproductive tract is pivotal for establishment of male fertility. The objective was to elucidate expression of aquaporin (AQP) water channels in the stallion reproductive tract. Real-time RT-PCR detected expression of AQP0-5 and AQP7-11 in testis, epididymis, and ductus deferens of mature stallions. There were two main expression patterns: (1) higher expression in testis than in epididymis and ductus deferens (AQP0, 24, 25, 28, 210, and 211); and (2) lower expression in testis than in epididymis and ductus deferens (AQP1, 23, 27, and 29). Overall, we inferred that fluid transport in the stallion testicle involved a collaboration of AQP subtypes (primarily AQP2, 25, 27, and 28). Based on immunohistochemistry, expression of AQP subtypes analyzed (i.e., AQP0, 22, 25, and 29) was localized to Leydig cells and elongated and round spermatids. Functional significance of AQP expression by Leydig cells remained uncertain. In elongated and round spermatids, AQP s likely contributed to the volume reduction observed during spermatogenesis. Subtypes AQP2 and AQP9 were the predominant forms expressed in epididymal tissue. Regulation of AQP2 expression, especially in the epididymal head, seemed to occur at the post-transcriptional level, as protein expression upon immunohistochemistry was pronounced, despite low transcript abundance. In epididymal tissue, AQPs likely contributed to fluid resorbtion, given their localization on the apical membrane of principal cells. Anat Rec, 296:1115Rec, 296: -1126Rec, 296: , 2013. V C 2013 Wiley Periodicals, Inc.Key words: stallion; aquaporin water channels; mRNA; protein Following completion of spermatogenesis, sperms leave the testis through the efferent ducts and enter the epididymis. During transit through the epididymis, spermatozoa undergo post-testicular maturation, including acquisition of progressive motility and the ability to undergo capacitation (Jones, 1998). These changes are due, at least in part, to changes in the composition of the epididymal luminal fluid microenvironment.