Green buildings should be sustainable, efficient, economical, and to improve the quality of life of users and nearby residents. Unfortunately, some architecture features fostered by energy and environmental certifications do not comply with fire prevention codes. Several factors can influence a building's energy efficiency and fire safety, such as bigger or smaller glass areas, building material thermal inertia, and the use of sustainable solutions such as green roofs. In this work, a methodology for integrating energy efficiency and fire prevention in green buildings is presented. A case study comparing a full glass skin and a building with 40% window size is considered. Also, the methodology permits modifications for obtaining a safe and energy efficient building.