The geometries, magnetic properties and stabilities of the transition metal (TM) atoms encapsulated M2Si18 (M = Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Zn) clusters have been systematically calculated by using the density function theory with generalized gradient approximation. Only when the doping metal atom has no more than half‐full d electronic shell, a double hexagonal prism cage‐like M2Si18 structure could form. The total moments of M2Si18 are either 0 or 2μB. Co2Si18 is the most stable cluster among all 3d doped M2Si18 clusters. The model of shell closure at the TM atom may be helpful to understand the stability of M2Si18 clusters. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2011