First Report of <i>Southern tomato virus</i> in Tomato (<i>Solanum lycopersicum</i>) in Korea

Jeong-hak, Oh，; Lee, Hong-Kyu; Park, Chung-Youl; Yeom, Y A; Min, Hyun-Geun; Yang, Hee-Ji; Jeong, Rae‐Dong; Kim, Hongsup; Moon, Jae Sun; Lee, Su-Heon

doi:10.1094/pdis-09-17-1499-pdn

Cited by 11 publications

(7 citation statements)

References 3 publications

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“…Southern tomato virus (STV) (family Amalgaviridae, genus Amalgavirus), a double-stranded (ds) RNA virus, was first detected in tomato plants in United States and Mexico exhibiting stunting of the growing tips, fruit discoloration, and reduced fruit size (Sabanadzovic et al, 2009). Since then, it was also reported in several European countries (Iacono et al, 2015;Verbeek et al, 2015;Pecman et al, 2018;Gaafar et al, 2019;HortDaily, 2019;WUR, 2019), Bangladesh (Padmanabhan et al, 2015c), China (Padmanabhan et al, 2015b), and South Korea (Oh et al, 2018), and so far only in tomato plants. STV coinfections with other viruses are frequent, as well as detections of STV in asymptomatic tomatoes (Alcalá-Briseño et al, 2017).…”

Section: Other Known Viruses Associated With Tomatomentioning

confidence: 99%

Global Advances in Tomato Virome Research: Current Status and the Impact of High-Throughput Sequencing

et al. 2021

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Viruses cause a big fraction of economically important diseases in major crops, including tomato. In the past decade (2011–2020), many emerging or re-emerging tomato-infecting viruses were reported worldwide. In this period, 45 novel viral species were identified in tomato, 14 of which were discovered using high-throughput sequencing (HTS). In this review, we first discuss the role of HTS in these discoveries and its general impact on tomato virome research. We observed that the rate of tomato virus discovery is accelerating in the past few years due to the use of HTS. However, the extent of the post-discovery characterization of viruses is lagging behind and is greater for economically devastating viruses, such as the recently emerged tomato brown rugose fruit virus. Moreover, many known viruses still cause significant economic damages to tomato production. The review of databases and literature revealed at least 312 virus, satellite virus, or viroid species (in 22 families and 39 genera) associated with tomato, which is likely the highest number recorded for any plant. Among those, here, we summarize the current knowledge on the biology, global distribution, and epidemiology of the most important species. Increasing knowledge on tomato virome and employment of HTS to also study viromes of surrounding wild plants and environmental samples are bringing new insights into the understanding of epidemiology and ecology of tomato-infecting viruses and can, in the future, facilitate virus disease forecasting and prevention of virus disease outbreaks in tomato.

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Section: Other Known Viruses Associated With Tomatomentioning

confidence: 99%

Global Advances in Tomato Virome Research: Current Status and the Impact of High-Throughput Sequencing

et al. 2021

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“…STV, first detected in USA and Mexico (Sabanadzovic et al., 2009) has since been reported in several countries in Europe and Asia (Oh et al., 2018.). STV has been reported to be associated with mottling, yellowing and/or chlorotic spotting (Gaafar et al., 2019), this report records the virus as also being associated with veinal necrosis.…”

Section: Primer/probe Sequence 5′‐3′mentioning

confidence: 99%

First detection, symptoms and management of Southern tomato virus in the United Kingdom

Harju

Skelton

Lazenby

et al. 2021

New Disease Reports

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“…Notably, a diverse array of viruses infecting tomatoes in Korea have been previously documented. Among the identified viruses affecting tomatoes in Korea are TYLCV, CMV, ToCV, ToMV, TSWV, southern tomato virus (STV), pepper mottle virus (PepMoV), and tomato bushy stunt virus (TBSV) [15][16][17][18][19][20].…”

Section: Introductionmentioning

confidence: 99%

Exploring Tomato Fruit Viromes through Transcriptome Data Analysis

Jo,

Choi,

Lee

et al. 2023

Viruses

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This study delves into the complex landscape of viral infections in tomatoes (Solanum lycopersicum) using available transcriptome data. We conducted a virome analysis, revealing 219 viral contigs linked to four distinct viruses: tomato chlorosis virus (ToCV), southern tomato virus (STV), tomato yellow leaf curl virus (TYLCV), and cucumber mosaic virus (CMV). Among these, ToCV predominated in contig count, followed by STV, TYLCV, and CMV. A notable finding was the prevalence of coinfections, emphasizing the concurrent presence of multiple viruses in tomato plants. Despite generally low viral levels in fruit transcriptomes, STV emerged as the primary virus based on viral read count. We delved deeper into viral abundance and the contributions of RNA segments to replication. While initially focused on studying the impact of sound treatment on tomato fruit transcriptomes, the unexpected viral presence underscores the importance of considering viruses in plant research. Geographical variations in virome communities hint at potential forensic applications. Phylogenetic analysis provided insights into viral origins and genetic diversity, enhancing our understanding of the Korean tomato virome. In conclusion, this study advances our knowledge of the tomato virome, stressing the need for robust pest control in greenhouse-grown tomatoes and offering insights into virus management and crop protection.

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First Report of Southern tomato virus in Tomato (Solanum lycopersicum) in Korea

Cited by 11 publications

References 3 publications

Global Advances in Tomato Virome Research: Current Status and the Impact of High-Throughput Sequencing

Global Advances in Tomato Virome Research: Current Status and the Impact of High-Throughput Sequencing

First detection, symptoms and management of Southern tomato virus in the United Kingdom

Exploring Tomato Fruit Viromes through Transcriptome Data Analysis

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