The goal of this paper is to investigate the aerodynamic and aerothermodynamic behavior of the Schiaparelli capsule after the deployment of a supersonic disk-gap-band (DGB) parachute during its re-entry phase into the Martian atmosphere. The novelty of this work lies in the investigation by LES (large-eddy simulations) of the coupled interaction of the flow field generated behind the capsule and that in front of the flexible DGB parachute. These simulations are performed at an altitude of 10 km and a Mach number around 2, i.e., a regime in which large canopy-area oscillations are observed. LES results have shown a strong interaction between the bow shock, the recompression and expansion waves, high pressure, density and temperature gradients, heat flux towards the airstream and the body implying turbulence generation, ingestion, and amplification through the shock waves. Vortices released from the capsule at a frequency of about 52 Hz and 159 Hz, corresponding to Strouhal numbers of ~0.2 and 0.75, respectively, are the main factors responsible for the instabilities of the hypersonic re-entry capsule and the disk-gap-band parachute coupled system. The nonlinear turbulence flow field generated at the capsule back is amplified when passing the parachute bow shock, and this is responsible for the non-axisymmetric behavior around and behind the parachute that caused the uncontrolled capsule oscillations and the Schiaparelli mission failure. In fact, an LES of the parachute without the capsule, for the same conditions, show a completely axisymmetric field, varying in time, but axisymmetric. In order to avoid this turbulence amplification, dampening of the vortex shedding is critical. Different techniques have been already proposed for other applications. In the case of capsule re-entry, due to the high temperatures in front of the capsule behind the bow shock since air plasma is generated, damping of the vortex shedding could be achieved by means of magnetohydrodynamic (MHD) control.