L-Serine metabolism in rabbit, dog, and human livers was investigated, focusing on the relative contributions of the three pathways, one initiated by serine dehydratase, another by serine:pyruvate/alanine:glyoxylate aminotransferase (SPT/AGT), and the other involving serine hydroxymethyltransferase and the mitochondrial glycine cleavage enzyme system (GCS). Under quasi-physiological in vitro conditions (1 mM L-serine and 0.25 mM pyruvate), flux through serine dehydratase accounted for only traces, and that through SPT/AGT substantially contributed no matter whether the enzyme was located in peroxisomes (rabbit and human) or largely in mitochondria (dog). As for flux through serine hydroxymethyltransferase and GCS, the conversion of serine to glycine occurred fairly rapidly, followed by GCS-mediated slow decarboxylation of the accumulated glycine. The flux through GCS was relatively high in the dog and low in the rabbit, and only in the dog was it comparable with that through SPT/AGT. An in vivo experiment with L-[3-3 H, 14 C]serine as the substrate indicated that in rabbit liver, gluconeogenesis from L-serine proceeds mainly via hydroxypyruvate. Because an important role in the conversion of glyoxylate to glycine has been assigned to peroxisomal SPT/AGT from the studies on primary hyperoxaluria type 1, these results suggest that SPT/AGT in this organelle plays dual roles in the metabolism of glyoxylate and serine.Among the three major enzymes involved in the metabolism of L-serine in mammalian liver, L-serine dehydratase (SDH), 1 serine:pyruvate/alanine:glyoxylate aminotransferase (SPT/ AGT), and serine hydroxymethyltransferase (SHMT), the former two are thought to participate in gluconeogenesis from L-serine (1). Notable features of SPT/AGT are that this enzyme is located entirely in peroxisomes in herbivores and humans, largely in mitochondria in carnivores (2-4), and in both organelles in rodents such as rat, and in the rat only the mitochondrial enzyme is induced by glucagon (5). It has been generally accepted from the known overproduction of oxalate in primary hyperoxaluria type 1, an inborn error of glyoxylate metabolism caused by a functional deficiency of peroxisomal SPT/AGT (6), that the enzyme in this organelle plays an important role in the conversion of glyoxylate to glycine, but the role of mitochondrial and peroxisomal SPT/AGT in the serine metabolism has not been elucidated. Cytosolic and mitochondrial isozymes of SHMT (cSHMT and mSHMT, respectively) have been shown to catalyze the interconversion between serine and glycine in conjugation with mitochondrial glycine cleavage enzyme system (GCS). This interconversion occurs especially when there is need for C 1 -substituted tetrahydrofolate cofactors or when either one of these amino acids are used or supplied (1). In the preceding paper (7), we considered SDH, SPT/AGT, and GCS to be the metabolic exits of the serineglycine pool and showed that SDH is the major enzyme in the metabolism of L-serine in rat liver. The flux through SPT/AGT was enhanced ...