Infrared linear array detectors frequently experience vertical, low-frequency, and periodic stripe noise during imaging, stemming from electro-mechanical interference. Unlike conventional periodic disturbances, this interference showcases long periodicities and is uniquely columnar in orientation. Its presence, especially within the low-frequency domain, renders conventional filtering techniques ineffective and, at times, detrimental to image quality. Addressing this challenge, we introduce Fourier-Assisted Correlative Denoising (FACD), a correlation-centric denoising approach tailored for such unique interference patterns. This mechanism begins with the capture of a pure background image, inclusive of periodic noise, during the non-uniform correction phase of the infrared detector. Leveraging the noise’s frequency domain attributes, we extract a one-dimensional single-cycle noise signal. The infrared image is subsequently segmented into parts, and using the detected noise periodicity, the one-dimensional signals for each segment are computed. By leveraging the correlation between these signals and the benchmark one-dimensional noise pattern, we ascertain the noise profile within each segment. This profile is then employed for spatial domain denoising across the entire image frame. Empirical assessments confirm that the FACD outperforms contemporary denoising techniques by augmenting the peak signal-to-noise ratio by approximately 2.5 dB, underscoring its superior robustness. Furthermore, in light of its specificity to this noise model, FACD rapidly denoises high-resolution real infrared linear array scans, thus meeting the stringent real-time and resolution imperatives of advanced infrared linear array scanning apparatuses.