The development of DC microgrids is reliant on multi-input converters, which offer several advantages, including enhanced DC power generation and consumption efficiency, simplified quality, and stability. This paper describes the development of a multiple input supply based modified SEPIC DC–DC Converter for efficient management of DC microgrid that is powered by two DC sources. Here Multi-Input SEPIC converter offers both versatility in handling output voltage ranges and efficiency in power flow, even under challenging operating conditions like lower duty cycle values. These features contribute to the converter's effectiveness in managing power within a DC microgrid. In this configuration, the DC sources can supply energy to the load together or separately, depending on how the power switches operate. The detailed working states with equivalent circuit diagrams and theoretical waveforms, under steady-state conditions, are shown along with the current direction equations. This paper also demonstrates the typical analysis of large-signal, small-signal, steady-state modeling techniques and detailed design equations. The proposed configuration is validated through the conceptual examination using theoretical and comprehensive MATLAB simulation results. Detailed performance analysis has been done for different cases with various duty ratios. Finally, to show the competitiveness, the multi-input SEPIC topology is compared with similar recent converters.