This research numerically evaluated the eigenvalue responses of the damaged fiber metal laminate (FML) structure. The current numerical model is delved into including crack‐type damage effect on the structural integrity/ stiffness via frequency response. In this regard, a complete mathematical model of FML has been derived through higher‐order shear deformation kinematics for computational purposes. The mathematical model is converted to computer code in the MATLAB platform to predict the eigenvalue responses of FML components with and without damage. The damage influences are considered via circular meshing of finite element steps associated with the isoparametric element (nine nodes and nine degrees of freedom for each node). The solution consistency is checked via convergence, and the results are compared with data available in the open domain. Further, an experimental test is carried out to improve confidence using an in‐house test rig. The experiment was conducted by varying the length of the FML in 0.1 m increments. The results showed good agreement between the numerical and experimental data, with the lowest deviation being 0.29% and the highest 8.97%. The developed numerical model is extended to analyze the influences of design parameters such as geometry shape, aspect ratio (a/b), thickness ratio (a/h) ratio, curvature ratio, and fiber layup sequence on the natural frequency response.