Although the negative impact of long-duration spaceflight on spine BMD has been reported, its impact on vertebral strength and risk of vertebral fracture remains unknown. This study examined 17 crewmembers with long-duration service on the International Space Station in whom computed tomography (CT) scans of the lumbar spine (L 1 and L 2 ) were collected preflight, immediately postflight and 1 to 4 years after return to Earth. We assessed vertebral strength via CT-based finite element analysis (CT-FEA) and spinal loading during different activities via subject-specific musculoskeletal models. Six months of spaceflight reduced vertebral strength by 6.1% (−2.3%, −8.7%) (median [interquartile range]) compared to preflight (p < 0.05), with 65% of subjects experiencing deficits of greater than 5%, and strengths were not recovered up to 4 years after the mission. This decline in vertebral strength exceeded (p < 0.05) the 2.2% (−1.3%, −6.0%) decline in lumbar spine DXA-BMD. Further, the subject-specific changes in vertebral strength were not correlated with the changes in DXA-BMD. Although spinal loading increased slightly postflight, the ratio of vertebral compressive load to vertebral strength for typical daily activities remained well below a value of 1.0, indicating a low risk of vertebral fracture despite the loss in vertebral strength. However, for more strenuous activity, the postflight load-to-strength ratios ranged from 0.3 to 0.7, indicating a moderate risk of vertebral fracture in some individuals. Our findings suggest persistent deficits in vertebral strength following long-duration spaceflight, and although risk of vertebral fracture remains low for typical activities, the risk of vertebral fracture is notable in some crewmembers for strenuous exercise requiring maximal effort.