SummaryFucoxanthin-chlorophyll proteins (FCPs) of diatoms are divided into three groups, the main light harvesting antennas Lhcf, the photosystem I-specifi c Lhcr, and Lhcx involved in photoprotection. All are closely related to higher plant light harvesting complexes (LHCs) when comparing sequences, albeit smaller and more hydrophobic. However, pigmentation differs from higher plant LHCs with around eight chlorophyll a , two chlorophyll c and six fucoxanthin per monomer. Fucoxanthin, with a carbonyl moiety conjugated to the polyene backbone, undergoes extreme bathochromic shifts upon protein binding, dividing the different fucoxanthins into more red, green and blue absorbing ones. Excitation energy transfer is extremely effi cient, either directly from chlorophyll c to chlorophyll a or from fucoxanthin to chlorophyll a involving the S 1 /ICT state of fucoxanthin. Most Lhcf assemble into trimers, whereby only in centric diatoms Lhcx was found in trimers as well, and specifi c oligomeric FCP complexes are present. Whereas the arrangement of FCPs around the photosystems is largely unknown, spectroscopic measurements together with homology considerations allow for a fi rst rough model of the pigment arrangement in trimeric and oligomeric FCP complexes. Blue fucoxanthin is bound analogously to lutein in LHCII, surrounded by the same four chlorophyll a , since binding sites are conserved. Additionally, chlorophyll a can be found in a604, a614, b605 and a611, although binding of the latter has to be different due to the lack of long wavelength absorption in FCPs. Chlorophyll c is most probably bound in b609 and a613. The red fucoxanthin cluster around helix 2, which has less sequence homology to LHCII. The green fucoxanthins are most probably located around the violaxanthin and b601 binding sites of LHCII, whereby the former is probably a mixed site for fucoxanthins and diadinoxanthin/diatoxanthin.