Nowadays, due to the consequences of climate change and global overpopulation research in the agricultural sector has become more crucial than ever. Although plants are sessile, they are not unprotected. It is known that plants are part of a large ecological unit that includes their microbiota -the microorganisms that live in contact with them. The presence of these microorganisms such as fungi and bacteria varies depending on biological and environmental factors. Different plant SUMMARY INTRODUCTION OBJECTIVES CHAPTER 1 CHAPTER 2 CHAPTER 3 CHAPTER 4 CHAPTER 5
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Drought StressDrought is widely considered to be the most significant stress factor. It can affect many aspects of plant growth and metabolism (Chaves et al., 2003). The specific morphological and physiological challenges depend on both the stress intensity and the plant's sensitivity to the stress (Mukarram et al., 2021). Plant responses to drought stress can be classified into two categories: morphophysiological and biochemical processes.The morphophysiological mechanisms are based on drought avoidance, escape, tolerance, or recovery (Fang & Xiong, 2015). For instance, tolerance is mainly achieved through the adjustment of osmotic processes, while drought avoidance Lindow & Brandl, 2003). Humidity allows bacteria to survive as epiphyte and is also essential for bacterial multiplication in the apoplast. Temperatures over the optimal 28ºC are reported to affect plant immunity and potentially reduce disease by limiting the production of phytotoxins.Finally, it is currently known that the plant microbiome can also affect the interaction between plant and pathogen. It has been proven that the addition of
Isolation and identification of fungal endophytesThe isolation of fungal endophytes is inevitably associated with their cultivability in vitro, so many currently unculturable endophytes are unexplored. Common fungal culture media include Potato Dextrose Agar (PDA), Malt Extract Agar (MEA), Czapex Dox Agar (CDA), Sabouraud Dextrose Agar (SDA) or Nutrient Agar (NA) (Sharma & Pandey, 2010;Syamsia et al., 2019).with sequences that are representative of the study regions, in several reliable databases, because not all deposited sequences might be correctly annotated, authenticated, or have taxonomic names up to date (Nilsson et al., 2006). Thus, the use of genomic sequencing in fungi represents an essential tool for the advances in the field of fungal endophytes, yet it is crucial to resort to highly specialized databases such as UNITE or Greengenes for correct identification.