Abstract.A total of 23 clinical isolates of Fusobacterium spp. were recovered at necropsy over a 2-year period from the respiratory tract of white-tailed deer (Odocoileus virginianus). Isolates were identified as Fusobacterium varium (18/23), Fusobacterium necrophorum subsp. funduliforme (3/23), and Fusobacterium necrophorum subsp. necrophorum (2/23). Using polymerase chain reaction-based detection of virulence genes, all F. necrophorum isolates were positive for the promoter region of the leukotoxin operon and the hemagglutinin-related protein gene, while all F. varium isolates were negative. The presence of the leukotoxin gene in F. necrophorum isolates and the absence of this gene in F. varium isolates were confirmed by Southern hybridization using 2 separate probes. Toxicity to bovine polymorphonuclear leukocytes was observed with all F. necrophorum isolates, but was not observed in any F. varium isolates. Susceptibility to antimicrobials was markedly different for F. varium as compared to F. necrophorum. In summary, no evidence of leukotoxin production was detected in any of the 23 F. varium isolates used in the current study. The data suggests that F. varium, the most common species isolated, may be a significant pathogen in deer with a different virulence mechanism than F. necrophorum. Tissue samples were cultured on prereduced Brucella agar plates b supplemented with 5% sheep blood, hemin (5 mg/l), and vitamin K (10 mg/l), and then incubated at 37°C for 48 hr in an anaerobic chamber. The 3-way antibiotic disk diffusion susceptibility test and nitrate test were conducted on Brucella agar plates with vancomycin, kanamycin, colistin, and nitrate disks.c Nitrate-negative isolates showing resistance to vancomycin and susceptibility to kanamycin and colistin were presumptively determined to be Fusobacterium sp.9 Following presumptive identification, the indole test was performed by placing 1 drop of indole reagent c onto an antibiotic disk. A pre-reduced McClung-Toabe egg yolk agar plate b was inoculated and incubated anaerobically at 37°C for 48-72 hr to determine lipase activity. Bile tolerance was determined by plating colonies onto pre-reduced Bacteroides fragilis isolation agar plates b containing 20% bile and incubating anaerobically at 37°C for 48-72 hr. Overnight cultures in prereduced anaerobically sterilized brain-heart infusion broth were observed for growth and sedimentation. All isolates were analyzed with commercial kits d,e according to the manufacturers' instructions.
DNA extraction and 16S ribosomal DNA sequencingChromosomal DNA was extracted from all isolates. Briefly, cultures were grown anaerobically on pre-reduced blood agar plates at 37°C for 48-72 hr. The DNA was isolated using a commercial kit f according to the manufacturer's instructions. The extracts were stored at −20°C. Universal primers (p515FPL forward GCGGATCCTCTAGACT GCAGTGCCAGCAGCCGCGGTAA, and p13B reverse CGGGATCCCAGGCCCGGGAACGTATTCAC) were used to amplify a region of the 16S ribosomal RNA gene by polymerase chain reaction (P...