Background: Fyn has been documented to have oncogenic features in multiple tumors, which might be a potential therapeutic target, however, few studies on the function role of Fyn and its specific inhibitors in melanoma.Methods: We investigated the impacts of Fyn and its inhibitors Lj-1-60 on melanoma by way of bioinformatics analysis, western blot, cell viability, cell cycle and apoptosis and xenograft tumor model as well as immunohistochemical staining. Pull-down and in vitro phosphorylation assay to further demonstrate Lj-1-60 targeting Fyn. Transcriptome sequencing and RT-PCR to confirm the potential mechanisms of Lj-1-60 in melanoma.Results: Our findings showed that Fyn is overexpressed in melanoma cells and knock down of Fyn suppresses the proliferation of melanoma cells. To identify the potential inhibitors of Fyn, our in-house library including total of 11277 chemicals was conducted to vitro screening, among those compounds, eighty-three inhibitors were further detected to explore the effect on melanoma cells growth and discovered a novel chalcone derivative Lj-1-60 exhibited low cellular toxicity and high anti-tumor efficacy. Lj-1-60 directly associates with Fyn and inhibits the Fyn kinase activity with Stat3 as substrate. What’s more, Lj-1-60 suppresses the proliferation of melanoma in vitro and in vivo through inducing cell cycle arrest and apoptosis. Moreover, the activation of Stat3 had also been abrogated both in Lj-1-60 treated melanoma cells or Fyn knocking down cells.Conclusion: Our study revealed a novel Fyn inhibitor could significantly suppress melanoma growth, which is a promising potential inhibitor for melanoma treatment.