Abstract. Rat heart and other organs contain mRNA coding for connexin43, a polypeptide homologous to a gap junction protein from liver (connexin32). To provide direct evidence that connexin43 is a cardiac gap junction protein, we raised rabbit antisera directed against synthetic oligopeptides corresponding to two unique regions of its sequence, amino acids 119-142 and 252-271. Both antisera stained the intercalated disc in myocardium by immunofluorescence but did not react with frozen sections of liver. Immunocytochemistry showed anti-connexin43 staining of the cytoplasmic surface of gap junctions in isolated rat heart membranes but no reactivity with isolated liver gap junctions. Both antisera reacted with a 43-kD polypeptide in isolated rat heart membranes but did not react with rat liver gap junctions by Western blot analysis. In contrast, an antiserum to the conserved, possibly extracellular, sequence of amino acids 164-189 in connexin32 reacted with both liver and heart gap junction proteins on Western blots. These findings support a topological model of connexins with unique cytoplasmic domains but conserved transmembrane and extracellular regions. The connexin43-specific antisera were used by Western blots and immunofluorescence to examine the distribution of connexin43. They demonstrated reactivity consistent with gap junctions between ovarian granulosa cells, smooth muscle cells in uterus and other tissues, fibroblasts in cornea and other tissues, lens and corneal epithelial cells, and renal tubular epithelial cells. Staining with the anticonnexin43 antisera was never observed to colocalize with antibodies to other gap junction proteins (connexin32 or MP70) in the same junctional plaques. Because of limitations in the resolution of the immunofluorescence, however, we were not able to determine whether individual cells ever simultaneously express more than one connexin type.AP junctions are membrane specializations that permit the exchange of small metabolites and ions between neighboring cells. While gap junctions and intercellular communication have been studied in a number of cell and tissue types, the structure of gap junctions has been best studied in rat liver where the interhepatocyte gap junctions have been shown to be composed of collections of membrane channels, called connexons, joined in mirror symmetry with connexons in the membrane of the adjacent cell (5, 24). The complete cDNA corresponding to a structural protein of the connexon has been cloned from rat and human liver (22,32). We have suggested the name connexin32 for this protein, based on its predicted molecular mass of 32 kD (2). Connexin32 has been confirmed as a gap junction protein by structural and functional criteria (6, 32).Data from cDNA and protein sequencing suggest that there is a family of related connexin proteins (2,-3, 21, 30). We have used low-stringency hybridization to clone an homologous cDNA from a rat heart library, which predicts a protein of 43 kD called connexin43 (2). The size of connexin43 and its amino-termi...