The aim of the study was to evaluate mercury contamination at twelve outlet sites of rivers in the Czech Republic (Labe, Ohře, Vltava, Berounka, Sázava, Otava, Lužnice, Svratka, Dyje, Morava and Odra). As an indicator, we used muscle tissue of the chub (Leuciscus cephalus) caught at selected sites in 2007. A total of 96 fish were examined. Total mercury was determined by atomic absorption spectrophotometry using the AMA 254 analyzer and methylmercury was determined by gas chromatography with electron-capture detection. Total mercury (THg) and methylmercury (MeHg) concentrations ranged 0.039-0.384 mg·kg -1 fresh weight and 0.033-0.362 mg·kg -1 fresh weight, respectively. Mercury bound in methylmercury (Hg Me ) made up on average about 82.2% of total mercury. The highest mercury concentrations were found in fish from Obříství, a site on Labe (THg 0.263 ± 0.086 mg·kg -1 ; MeHg 0.256 ± 0.084 mg·kg -1 ). Mercury concentrations in fish from rivers that cross the borders of the Czech Republic (Labe, Odra and Morava) were low. The Czech Republic therefore does not contribute significantly to river pollution outside its national borders. Hazard indices of the sites monitored were well below 1, and reached 1.365 only in Obříství on Labe for fisherman's family members (i.e. in the case of annual consumption of 10 kg fish). This indicates possible hazards involved in eating meat of fish caught in that location. Based on PTWI for methylmercury, the maximum amount of fish meat allowed for consumption per week was calculated. The site with the lowest value was Obříství on Labe (0.44 kg). The results of this study present a partial contribution to health risk assessment on the major rivers in Czech Republic.Leuciscus cephalus, methylmercury/mercury ratio, THg, MeHg, hazard index, PTWI