Genetic diversity and population structure of watermelon (Citrullus sp.) genotypes

Pandey, Anamika; Isik, Rabia; Türkmen, Önder; Acar, Ramazan; Seymen, Musa; Hakkı, Erdoğan E.

doi:10.1007/s13205-019-1736-2

Cited by 15 publications

(8 citation statements)

References 59 publications

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“…Moreover, we speci ed the plant height (cm), canopy diameter (cm), number of branches, and stem diameter (mm). We measured the plant height from the soil surface (Van Riper and Owen 1964;Tamkoç 1992) and canopy diameter for the maximum diameter (Acar et al 2019).…”

Section: Morphological Studiesmentioning

confidence: 99%

WITHDRAWN: The Genetic Structure and Marker- Morphological Trait Associations in Forage Kochia Population Grown in Central Anatolia

Koyun

Hakkı

Acar

2023

Preprint

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Forage kochia, a naturally growing and semi-shrub in Türkiye's flora, tolerates adverse soil and climatic conditions. In the research, the morphological and yield values of the forage kochia populations collected from 5 different locations in Konya were examined during 2018–2019. According to morphological and yield values, we determined 80 plants, 76 plants with excellent yield potential, and four outgroup plants for molecular studies. A total of 250 polymorphic fragments were obtained from these 80 plants. In our study, the average PIC value was 0.322, and the mean MI value was 8.99. Genetic diversity parameters of the populations were obtained using the GenAlEx program, and it was found that the mean He was 0.209, and the percentage of polymorphic loci was 81.20%. According to the results of AMOVA, among-population variation was 9%, while within-population variation was 91%. The dendrogram obtained as a result of the study determined that the genetic distance between plants varied between 0.63 and 0.90. According to the similarity index used in the study, it was stated that there was a high degree of similarity (90%) between 3212 and 5419 coded plants. Furthermore, it was noted that the markers related with plant height were associated with canopy diameter, number of main branches, and leaf color. The results show us that these populations are a treasured gene resource for plant breeding.

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Section: Morphological Studiesmentioning

confidence: 99%

WITHDRAWN: The Genetic Structure and Marker- Morphological Trait Associations in Forage Kochia Population Grown in Central Anatolia

Koyun

Hakkı

Acar

2023

Preprint

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“…Elias (13) found that the largest genetic distance between Charleston Gray and Sugar Baby cultivars was 0.349, and the lowest genetic distance between Crimson Sweet and Sugar Baby was 0.149 after using 12 primers belonging to ISSR technology to show genetic diversity among 21 genotypes belonging to three cultivars, from red watermelon they are Crimson Sweet, Sugar Baby and Charleston Gray. Studied the genetic similarity of 25 genotypes of Citroides (Citron watermelon) and Lanatus (Dessert watermelon) in order to transfer disease resistance from Citroides to Lanatus, which were selected from five different geographical locations using RAPD and ISSR techniques, ISSR had the highest polymorphism of 95.4% , the genotypes of Citron watermelon in Saudi Arabia were similar to those in Turkey, while the highest genetic variance was found between the commercial and local genotypes of Dessert watermelon in Turkey (24). This study was aimed to investigate genetic relation among different watermelon genotypes.…”

Section: Introductionmentioning

confidence: 99%

Investigate Genetic Relation Among Watermelon Cultivars Using Molecular Dna Markers

Elias¹,

Al-Jubouri²

2022

Iraqi J. Agric. Sci.

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This study was aimed to investigate genetic relation among 21 selective of watermelon seeds which collected from different commercial companies for different origins and produced at different years by using 12 primers for Inter Simple Sequence Repeat (ISSR). The results showed that the selective of Crimson sweet had genotypes highest genetic relation between ( K1 and K2) it was found less than the genetic similarity between ( K1and K4) , ( K2 and K4) .The four selective were divided two groups A and B. The results showed that the selective a Charleston gray had the highest genetic relation between (CH4 and CH6) while it found less than the genetic relation between (CH5 and CH9). The ten selectives were divided two cluster A and B,The groups A was divided three sub clusters .The results revealed that the highest genetic relation between the selective of the variety Sugar baby (S1and S3). While found less genetic relation between the (S1 and S5) and divided the selectives of Sugar baby into two main cluster A and B, The cluster B was divided two sub cluster. The result found that the highest genetic relation among the 21 selective it was between ( CH4 and CH6), while found less than of genetic similarity among ( CH8 and S5) ( CH8 and S2),( S2 and K1) ,( S2 and K2) ,( S2 and CH9),( K1 and S5) ( S5 and CH9). The 21 selectives was divided two main clusters A and B the group A was divided to three sub clusters while the group B was divided two sub clusters. It could be concluded that the genetic relation it is very important in the hybridization programs to it prove a large genetic base to benefit of plant breeding programs.

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“…Hence, genome analyses including sequencing, developing molecular markers, transcriptome analyses etc. have gained importance (Sun et al, 2019;Jiang et al, 2019;Pandey et al, 2019). Transposons are also valuable sequences to figure out watermelon genome in detail.…”

Section: Resultsmentioning

confidence: 99%

Retrotransposon Analyses in Cucurbitaceae family

Marakli¹

2019

International Journal of Science Letters

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Retrotransposons are class I mobile elements, moving via an RNA intermediate. There are many retrotransposon-based molecular markers. Here, Nikita and Sukkula retrotransposons were investigated in Cucumis sativus L., Citrullus lanatus and Cucumis melo L. by using IRAP (Inter-Retrotransposon Amplified Polymorphism) molecular marker method. Nikita and Sukkula band profiles were similar in the plants, indicating only homomorphic band profiles. These barley-specific retrotransposons were identified in these three plant species for the first time. Findings could provide valuable information for understanding genomes of these plants and evolutionary relationships among them..

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Genetic diversity and population structure of watermelon (Citrullus sp.) genotypes

Cited by 15 publications

References 59 publications

WITHDRAWN: The Genetic Structure and Marker- Morphological Trait Associations in Forage Kochia Population Grown in Central Anatolia

WITHDRAWN: The Genetic Structure and Marker- Morphological Trait Associations in Forage Kochia Population Grown in Central Anatolia

Investigate Genetic Relation Among Watermelon Cultivars Using Molecular Dna Markers

Retrotransposon Analyses in Cucurbitaceae family

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