A 60-nucleotide region (S1) downstream of the transcription start site of the cauliflower mosaic virus 35S RNA can enhance gene expression. By using transient expression assays with plant protoplasts, this activity was shown to be at least partially due to the effect of transcriptional enhancers within this region. We identify sequence motifs with enhancer function, which are normally masked by the powerful upstream enhancers of the 35S promoter. A repeated CT-rich motif is involved both in enhancer function and in interaction with plant nuclear proteins. The S1 region can also enhance expression from heterologous promoters.Without doubt, the most comprehensively studied plant promoter is the 35S promoter of cauliflower mosaic virus (CaMV). Exhaustive investigation has catalogued its behavior in many plant species and in many expression systems (reviewed in reference 32). The promoter architecture has been extensively characterized, and the combinatorial nature of its complement of enhancers is fairly well understood. Despite this, the full intricacy of the CaMV 35S promoter remains to be unraveled. In this report, we present evidence uncovering a hitherto overlooked feature of this promoter.Previous work in our laboratory reported enhancement of expression by inclusion of the first 60 nucleotides (nt) of the 35S RNA leader sequence (stimulatory region 1 [S1]). At that time, we ascribed this solely to an effect on translation (20). More recently, we characterized an element in the equivalent position in the leader of the pregenomic RNA of rice tungro bacilliform virus (RTBV) that also enhances the expression of reporter genes in protoplast expression systems. A DNA-based element within this region was found to contribute to promoter activity and to be the target for the binding of several proteins from rice nuclear extracts (12, 28). These findings led us to reassess the CaMV leader S1 region, asking whether, in this case also, there could be elements in the transcribed region that contribute to promoter activity.Here we describe the effect of the S1 sequence on reporter gene expression in protoplast transient expression systems. We find that repeats of a CT-rich motif positively affect promoter activity, both from their usual location within the leader and when translocated to a position upstream of the transcription start site. Plant nuclear proteins bind specifically to these motifs.
MATERIALS AND METHODSPlasmids. Plasmids p35S-GUS (carrying the wild-type 35S promoter [Ϫ270 to Ϫ1 relative to the transcription start site] from strain CM4-184) and pMTF-GUS (carrying a methylation target-free derivative of 35S [MTF]), both with the wild-type S1 leader between the promoter and the -glucuronidase (GUS) reporter gene, were constructed as described by Hohn et al. (31). Deletion of the 5Ј part of the MTF up to position Ϫ90 (BamHI-EcoRV deletion) yielded the truncated version pϪ90MTF-GUS.Replacement of the promoter fragment BamHI-BglII (Ϫ270 to Ϫ46) in pMTF-GUS with the Ϫ402-to-Ϫ130 region of the potato gst-1 promote...