2021
DOI: 10.1093/g3journal/jkab226
|View full text |Cite
|
Sign up to set email alerts
|

Genome archaeology of two laboratory Salmonella enterica enterica sv Typhimurium

Abstract: The Salmonella research community has used strains and bacteriophages over decades, exchanging useful new isolates among laboratories for study of cell surface antigens, metabolic pathways and restriction-modification studies. Here we present the sequences of two laboratory Salmonella strains (STK005, an isolate of LB5000; and its descendant ER3625). In the ancestry of LB5000, segments of ∼15 and ∼42 kb were introduced from Salmonella enterica sv Abony 103 into Salmonella enterica sv Typhimurium LT2, forming s… Show more

Help me understand this report
View preprint versions

Search citation statements

Order By: Relevance

Paper Sections

Select...
2
1
1
1

Citation Types

0
8
0

Year Published

2021
2021
2024
2024

Publication Types

Select...
4
2

Relationship

3
3

Authors

Journals

citations
Cited by 6 publications
(8 citation statements)
references
References 63 publications
0
8
0
Order By: Relevance
“…Our experimental host, ER3625, is a descendant of the model organism LT2 carrying a mutated allele of StySA with other known RM systems disabled. Automated annotation of its genome [ 36 , 38 ] predicted a relationship of the StySA region of ER3625 to BREX and Pgl systems. We adopt the automated name assignments from NCBI; to facilitate reference to the ancestor LT2, at the first appearance of each gene we include the LT2 Locus_ID in parentheses.…”
Section: Resultsmentioning
confidence: 99%
See 4 more Smart Citations
“…Our experimental host, ER3625, is a descendant of the model organism LT2 carrying a mutated allele of StySA with other known RM systems disabled. Automated annotation of its genome [ 36 , 38 ] predicted a relationship of the StySA region of ER3625 to BREX and Pgl systems. We adopt the automated name assignments from NCBI; to facilitate reference to the ancestor LT2, at the first appearance of each gene we include the LT2 Locus_ID in parentheses.…”
Section: Resultsmentioning
confidence: 99%
“…ER3625 carried the DNA modification pattern expected for an LT2 derivative except for StySA sites (GATC A G, modification on the bold A), which were not modified [ 36 ]. The expected MTase, pglX , has no changes from LT2.…”
Section: Resultsmentioning
confidence: 99%
See 3 more Smart Citations