2021
DOI: 10.1016/j.plantsci.2020.110810
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Genome-wide association study (GWAS) of major QTLs for bunch and oil yield related traits in Elaeis guineensis L

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Cited by 11 publications
(5 citation statements)
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“…GWAS has been performed on many domesticated crop populations even in the oil palm, for different and important economic traits (Ithinin et al, 2017; Babu et al, 2020 and 2021). GWAS has been used even to investigate pleiotropy (Wisser et al, 2011; Schaid et al, 2016; Rice et al, 2020).…”
Section: Discussionmentioning
confidence: 99%
“…GWAS has been performed on many domesticated crop populations even in the oil palm, for different and important economic traits (Ithinin et al, 2017; Babu et al, 2020 and 2021). GWAS has been used even to investigate pleiotropy (Wisser et al, 2011; Schaid et al, 2016; Rice et al, 2020).…”
Section: Discussionmentioning
confidence: 99%
“…Genetic diversity analysis was the basis of SSR molecular marker and quality trait association analysis [13], genetic diversity and population of germplasm resources (or natural populations) analysis of somatic genetic structure is the premise of association mapping [23][24][25]. The UPGMA method and structure analysis were used to verify each other in this study, all germplasms were divided into four groups, and each group was highly related to the germplasm source.…”
Section: Discussionmentioning
confidence: 99%
“…Association analysis, also called association mapping, which is a method based on linkage disequilibrium and using natural populations as materials to detect the signi cant association frequency between markers in linkage disequilibrium and target traits in plants [10][11][12]. Relevance licensing only requires natural populations or germplasm resources, it has been widely used in wheat, soybean, corn and other crops [13][14][15], and has achieved good results. Although association analysis has been applied to many crops, it has not been reported that SSR markers can be used to carry out association analysis of active components in the germplasm resources of Chinese herbal medicine B. balsamifera.…”
Section: Introductionmentioning
confidence: 99%
“…Traditional SSR markers, which are highly polymorphic and codominant, have been widely used in genetic diversity evaluations [ 27 , 29 , 30 , 31 , 32 , 33 ], QTL mapping [ 35 ], background selection and marker-assisted selection (MAS)-based breeding [ 48 ]. The advantages of SSR-seq technology in relation to the use of conventional SSRs and other markers have been demonstrated [ 36 , 40 ].…”
Section: Discussionmentioning
confidence: 99%
“…SSRs are 2–5 bp sequences that are repeated nose-to-tail; the number of copies at each locus is what varies [ 26 ]. Due to their advantageous characteristics of universal distribution, high density and codominance, SSRs have been used as effective tools in genetic diversity analysis [ 27 , 28 , 29 , 30 , 31 , 32 , 33 ], gene mapping [ 34 ], and genome-wide association studies (GWASs) of major quantitative-trait loci (QTLs) [ 35 ]. Traditional gel electrophoresis is unable to accurately distinguish the number of repeats present in SSR amplicons.…”
Section: Introductionmentioning
confidence: 99%