Genome-wide identification and association analysis for virus-responsive lncRNAs in rice (Oryza sativa L.)

Cao, Weilin; Cao, Jiashu; Gao, Jiming; Wang, Ruolin; Liu, Ying; Li, Changyuan; Gan, Li‐Ming; Zhu, Changxiang

doi:10.1007/s10725-022-00833-w

Cited by 2 publications

(2 citation statements)

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“…More recently, disease-responsive (e.g. to Rice Black-Streaked Dwarf Virus and Rice Stripe Virus) lncRNA profile was investigated in rice ( Cao et al., 2022 ). A total of 21 lncRNAs were found to be up-regulated in response to both virus and putative targets including an excess of 1,000 co-regulated transcripts involved in transcriptional regulation, plant hormone signal transduction, phenylpropanoid biosynthesis, and plant-pathogen interaction terms ( Cao et al., 2022 ).…”

Section: Lncrnas Response To Biotic Stress In Plantsmentioning

confidence: 99%

“…LncRNA are heterogeneously regulated transcript that has emerged as a versatile regulator in a variety of development processes ( Zhang et al., 2021a ; Cao et al., 2022 ; Ren et al., 2022 ; Ye et al., 2022 ). In Brassica rapa , 47 cis -acting lncRNAs and 451 trans -acting lncRNAs were identified during pollen development and fertilization.…”

Section: Introductionmentioning

confidence: 99%

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Current perspectives of lncRNAs in abiotic and biotic stress tolerance in plants

Jin,

Wang,

et al. 2024

Front. Plant Sci.

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Abiotic/biotic stresses pose a major threat to agriculture and food security by impacting plant growth, productivity and quality. The discovery of extensive transcription of large RNA transcripts that do not code for proteins, termed long non-coding RNAs (lncRNAs) with sizes larger than 200 nucleotides in length, provides an important new perspective on the centrality of RNA in gene regulation. In plants, lncRNAs are widespread and fulfill multiple biological functions in stress response. In this paper, the research advances on the biological function of lncRNA in plant stress response were summarized, like as Natural Antisense Transcripts (NATs), Competing Endogenous RNAs (ceRNAs) and Chromatin Modification etc. And in plants, lncRNAs act as a key regulatory hub of several phytohormone pathways, integrating abscisic acid (ABA), jasmonate (JA), salicylic acid (SA) and redox signaling in response to many abiotic/biotic stresses. Moreover, conserved sequence motifs and structural motifs enriched within stress-responsive lncRNAs may also be responsible for the stress-responsive functions of lncRNAs, it will provide a new focus and strategy for lncRNA research. Taken together, we highlight the unique role of lncRNAs in integrating plant response to adverse environmental conditions with different aspects of plant growth and development. We envisage that an improved understanding of the mechanisms by which lncRNAs regulate plant stress response may further promote the development of unconventional approaches for breeding stress-resistant crops.

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Section: Lncrnas Response To Biotic Stress In Plantsmentioning

confidence: 99%