2013
DOI: 10.4161/fly.22353
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Genomic resources for multiple species in the Drosophila ananassae species group

Abstract: The development of genomic resources in non-model taxa is essential for understanding the genetic basis of biological diversity. Although the genomes of many Drosophila species have been sequenced, most of the phenotypic diversity in this genus remains to be explored. To facilitate the genetic analysis of interspecific and intraspecific variation, we have generated new genomic resources for seven species and subspecies in the D. ananassae species subgroup. We have generated large amounts of transcriptome seque… Show more

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Cited by 9 publications
(7 citation statements)
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References 62 publications
(89 reference statements)
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“…Kinkell virus, along with transcriptome sequences from the fly genera Bactrocera 62,66 and Ceratitis 63 , the beetle Colaphellus 67 , the thrip Frankliniella 68 , and the spider Latrodectus 69 , appears to define a major new clade that falls within or close to the Iflaviruses (Fig 2 D). Similarly, Corseley virus, which is almost identical to transcriptome sequences from D. pseudoananassae 70 and is related to transcriptome sequences from the bug genus Lygus 71 and the beetle genus Anoplophora 72 , appears to define an entirely new group of viruses distantly related to Tombusviridae and the recently-described Diaphorina citri associated C virus 73 (which is itself closely related to the newly identified Tartou virus of S. deflexa; Fig 2 E).…”
Section: New Viruses Without Close Relativesmentioning
confidence: 76%
“…Kinkell virus, along with transcriptome sequences from the fly genera Bactrocera 62,66 and Ceratitis 63 , the beetle Colaphellus 67 , the thrip Frankliniella 68 , and the spider Latrodectus 69 , appears to define a major new clade that falls within or close to the Iflaviruses (Fig 2 D). Similarly, Corseley virus, which is almost identical to transcriptome sequences from D. pseudoananassae 70 and is related to transcriptome sequences from the bug genus Lygus 71 and the beetle genus Anoplophora 72 , appears to define an entirely new group of viruses distantly related to Tombusviridae and the recently-described Diaphorina citri associated C virus 73 (which is itself closely related to the newly identified Tartou virus of S. deflexa; Fig 2 E).…”
Section: New Viruses Without Close Relativesmentioning
confidence: 76%
“…EXPERIMENTAL PROCEDURES Crosses were as described in [56], and phenotyping was as described in [26]. All molecular biology procedures followed standard protocols.…”
Section: Discussionmentioning
confidence: 99%
“…Also, the genome of D. melanogaster was one of the earliest sequenced animal genome [10], even in its heterochromatic compartment [11,12]. D. melanogaster is currently widely used as an animal model to study the most diverse aspects of genetics, from basic inheritance to cancer [9], but additional genomic resources are continuously developed for other species of the Drosophila genus that will soon become model species in specific fields of investigation [13][14][15][16][17].…”
Section: Introductionmentioning
confidence: 99%