Genomic sequence and host range studies reveal considerable variation within the species Arracacha virus B

Jones, R. A. C.; Fox, Adrian; Boonham, Neil; Adams, Ian

doi:10.1007/s00705-019-04395-7

Cited by 2 publications

(3 citation statements)

References 16 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Partial sequences of its RNA-1 and RNA-2 were subsequently obtained from several of its isolates (Krengiel et al, 1993;Shindo et al, 1993). Comparisons between the aa sequences of the (Jones et al, 2019).…”

Section: Viruses Incorrectly Not Renamedmentioning

confidence: 99%

“…The main use of such sequence data is to support diagnostics for ready differentiation of viral pathogens that are listed as biosecurity threats from those that are not. An example of this within European Union (EU) plant health regulations is the discrimination of the potato-infecting "oca strain" of AVB discussed above (Adams et al, 2013a;Jones, 1981;Jones et al, 2019), which is regulated, from AVB's non-potato infecting "arracacha strain" that is not regulated (Jones et al, 2019).…”

Section: Supp Orting Pl Ant He Alth Reg Ul Ati On S and Ris K A Ss mentioning

confidence: 99%

“…The biological and phylogenetic differences between these two strains, highlighted by Jones et al (2019), could now provide a basis for development of differential diagnostic assays that support these regulations. There is also a need to clarify unidentified causal agents of diseases that are listed either as "agents" or under their disease names, without knowledge of the pathogen involved.…”

Section: Supp Orting Pl Ant He Alth Reg Ul Ati On S and Ris K A Ss mentioning

confidence: 99%

See 2 more Smart Citations

Historical virus isolate collections: An invaluable resource connecting plant virology’s pre‐sequencing and post‐sequencing eras

et al. 2020

Self Cite

View full text Add to dashboard Cite

Many laboratories maintain historical collections of preserved plant virus isolates that store a wealth of untapped data, including original type isolates, studied in the pre‐sequencing era. Currently, many recently recognized virus species exist with no supporting reference sequences. Also, many virus sequences appear new when compared to available sequences, but, on sequencing pre‐sequencing era isolates, they may coincide. Such linkages allow access to data from previously determined biological and other parameters from pre‐sequencing era studies. These linkages are increasingly being found using high‐throughput sequencing, helping clarify virus taxonomy and improving understanding of virus ecology and evolution. Thus, mistakes can be avoided in naming viruses and in combining or separating them, as well as enabling identification of unknown viruses preserved long ago. With well‐established viruses, success in dating and other evolutionary studies, and discovery of changes in regional virus populations, both depend upon comparisons between recent and old isolate sequences covering the greatest possible time periods. Such studies help reveal the extent that human activities have influenced virus evolution and changed virus populations on a global scale. Sequencing virus genomes from herbarium specimens, archaeological specimens, or living plant collections can provide complementary data. By bringing context to newly detected viruses and supporting plant pest risk analyses, linking new virus discoveries to previously generated disease symptom, host range, virus transmission, and geographical distribution data has important implications for plant health regulation. Also, historical isolates can provide an invaluable resource facilitating biosecurity investigations involving virus introductions, entry pathways, and baseline surveillance.

show abstract

Section: Viruses Incorrectly Not Renamedmentioning

confidence: 99%

Section: Supp Orting Pl Ant He Alth Reg Ul Ati On S and Ris K A Ss mentioning

confidence: 99%

Section: Supp Orting Pl Ant He Alth Reg Ul Ati On S and Ris K A Ss mentioning

confidence: 99%

See 1 more Smart Citation

Historical virus isolate collections: An invaluable resource connecting plant virology’s pre‐sequencing and post‐sequencing eras

et al. 2020

Self Cite

View full text Add to dashboard Cite

show abstract

PM 3/21(3) Post entry quarantine for potato

2019

EPPO Bulletin

View full text Add to dashboard Cite

show abstract

Genomic sequence and host range studies reveal considerable variation within the species Arracacha virus B

Cited by 2 publications

References 16 publications

Historical virus isolate collections: An invaluable resource connecting plant virology’s pre‐sequencing and post‐sequencing eras

Historical virus isolate collections: An invaluable resource connecting plant virology’s pre‐sequencing and post‐sequencing eras

PM 3/21(3) Post entry quarantine for potato

Contact Info

Product

Resources

About