Genomics, Phenomics, and Next Breeding Tools for Genetic Improvement of Safflower (Carthamus tinctorius L.)

Yılmaz, Abdurrahim; Yeken, Mehmet Zahit; Ali, Fawad; Barut, Muzaffer; Nadeem, Muhammad Azhar; Yılmaz, Hilal; Naeem, Muhammad; Hacioğlu, Burcu Tarıkahya; Arslan, Yusuf; Kurt, Cemal; Aasım, Muhammad; Baloch, Faheem Shehzad

doi:10.1007/978-3-030-70420-9_11

Cited by 6 publications

(3 citation statements)

References 186 publications

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“…Sustainable agriculture and crops are affected by abiotic and biotic stresses, including viruses, that cause millions of dollars’ worth of yield losses every year ( Mumford et al, 2016 ; Yılmaz et al, 2021 ). Identifying plants infected with new viruses and the increase of virus population in agricultural areas or a host are major factors in controlling plant viruses.…”

Section: Discussionmentioning

confidence: 99%

A novel study on bean common mosaic virus accumulation shows disease resistance at the initial stage of infection in Phaseolus vulgaris

et al. 2023

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Accurate and early diagnosis of bean common mosaic virus (BCMV) in Phaseolus vulgaris tissues is critical since the pathogen can spread easily and have long-term detrimental effects on bean production. The use of resistant varieties is a key factor in the management activities of BCMV. The study reported here describes the development and application of a novel SYBR Green-based quantitative real-time PCR (qRT-PCR) assay targeting the coat protein gene to determine the host sensitivity to the specific NL-4 strain of BCMV. The technique showed high specificity, validated by melting curve analysis, without cross-reaction. Further, the symptoms development of twenty advanced common bean genotypes after mechanical BCMV-NL-4 infection was evaluated and compared. The results showed that common bean genotypes exhibit varying levels of host susceptibility to this BCMV strain. The YLV-14 and BRS-22 genotypes were determined as the most resistant and susceptible genotypes, respectively, in terms of aggressiveness of symptoms. The accumulation of BCMV was analyzed in the resistant and susceptible genotypes 3, 6, and 9 days following the inoculation by the newly developed qRT-PCR. The mean cycle threshold (Ct) values showed that the viral titer was significantly lower in YLV-14, which was evident in both root and leaf 3 days after the inoculation. The qRT-PCR thus facilitated an accurate, specific, and feasible assessment of BCMV accumulation in bean tissues even in low virus titers, allowing novel clues in selecting resistant genotypes in the early stages of infection, which is critical for disease management. To the best of our knowledge, this is the first study of a successfully performed qRT-PCR to estimate BCMV quantification.

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Section: Discussionmentioning

confidence: 99%

A novel study on bean common mosaic virus accumulation shows disease resistance at the initial stage of infection in Phaseolus vulgaris

et al. 2023

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“…They are also economically, socially, and environmentally significant as they provide food, feed, and raw materials (Can et al, 2021). These crops can adapt to different agricultural conditions of the world, from temperate to tropical regions (Yılmaz et al 2021b). Approximately 8% of the world's oilseed needs are met by peanut agriculture (Yılmaz et al, 2021c).…”

Section: Introductionmentioning

confidence: 99%

Vermicompost Enhances Saline Tolerance in Peanut (Arachis hypogaea L.)

Yılmaz

2023

Black Sea Journal of Agriculture

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Peanut is an oilseed legume plant with multi-purpose uses that contains many bioactive components, including polyphenols, phenolics, and flavonoids. It is one of the main foodstuffs, both in meeting protein deficiencies and in meeting high energy needs. This study investigated the effects of vermicompost fertilizer application on chlorophyll content and yield parameters of peanuts grown under saline stress in climate room conditions. Root weight, root length, stem weight, stem length, leaf weight, leaf number, and chlorophyll content values were determined in the first developmental period of the plant in the experiment, which was established with three replications according to the randomized plots experimental design. As a result of the study, statistical differences were determined between control and vermicompost treatments under high saline stress conditions (300 mM). The results obtained from the vermicompost treatment, especially in stem and root weights, prove this treatment's usefulness. The principal component analysis (PCA) clustered all parameters according to applications. Correlation analysis revealed significant relationships, especially for vermicompost treatment. It is thought that the information obtained from the experimental results will be helpful to entrepreneurs investigating the saline stress resistance of peanuts.

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“…Germplasm collections serve as vital repositories of plant genetic diversity (Çelik et al, 2023;Nadeem et al, 2020;Nadeem et al, 2021;Yılmaz et al, 2021). Various institutions, botanical gardens, and research organizations have initiated efforts to collect, conserve, and document marigold germplasm from different regions.…”

Section: Introductionmentioning

confidence: 99%

Unveiling the phytochemical variability of fatty acids in world marigold (Calendula officinalis L.) germplasm affected by genotype

BARUT,

TANSI,

KARAMAN

2023

International Journal of Agriculture Environment and Food Sciences

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Marigold is an annual herbaceous medicinal and aromatic plant, native to the Mediterranean region. Although marigold flowers have attracted considerable attention, the noteworthy characteristics of marigold seeds have often been overlooked. The industrial sector holds keen interest in marigold due to the presence of calendic acid in its seeds. Moreover, calendic acid exhibits promising anti-cancer properties, adding to the growing interest in the medicinal potential of this plant. In this study, a total of 31 marigold genotype seeds from fifteen different countries were used as experimental material. The observed seed oil content exhibited a range of values spanning from 6.00% to 20.33%, with a mean value of 11.59%. GC/MS analysis was conducted to evaluate the chemical variability associated with genotypic changes. Notably, the main fatty acids observed in the oil of these genotypes were α-calendic acid (ranging from 6.91% to 51.42%), linoleic acid (ranging from 30.50% to 48.25%), oleic acid (ranging from 8.26% to 22.50%), and palmitic acid (ranging from 3.86% to 9.28%). Particularly noteworthy is the emergence of genotypes PI 420376, PI 545694, PI 545701, PI 578109, PI 597588, PI 597591, and PI 597594, boasting calendic acid content exceeding 50%. Furthermore, the values of calendic acid exhibit significant variation across countries. The range extends from the United Kingdom, displaying one of the lower values, to Ontario, Canada, which represents countries with notably higher values. Consequently, there exists a necessity to enhance the proportion of calendic acid within marigold through strategic plant breeding techniques. This can be achieved through the selection and development of marigold cultivars with higher calendic acid contents.

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Genomics, Phenomics, and Next Breeding Tools for Genetic Improvement of Safflower (Carthamus tinctorius L.)

Cited by 6 publications

References 186 publications

A novel study on bean common mosaic virus accumulation shows disease resistance at the initial stage of infection in Phaseolus vulgaris

A novel study on bean common mosaic virus accumulation shows disease resistance at the initial stage of infection in Phaseolus vulgaris

Vermicompost Enhances Saline Tolerance in Peanut (Arachis hypogaea L.)

Unveiling the phytochemical variability of fatty acids in world marigold (Calendula officinalis L.) germplasm affected by genotype

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